contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA484127" and tax_phylum = "Evosea"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5551943 | 5551943 | PRJNA484127_P_NODE_14885_length_329_cov_1.398438_g14736_i0 | PRJNA484127 | 14885 | 329 | 1.398438 | 4.60086102 | Endolimax piscium | 1284676 | Evosea | other_Eukaryota | 512 | 1.1799999999999998e-140 | NTclustered | gi|443299290|gb|JX101955.1| | 1284676 | g14736 | i0 | 94.833 | 41.6717325227964 | 329 | 16 | 99 | 1 | 1 | 328 | 348 | 20 | Endolimax piscium clone PM2 18S ribosomal RNA gene, partial sequence | blastn | 13710 | 512 | 1 | Eukaryota | Amoebozoa | Evosea | Mastigamoebida | Entamoebidae | Endolimax | Endolimax piscium | |||
| 5552273 | 5552273 | PRJNA484127_P_NODE_34805_length_247_cov_0.896552_g34656_i0 | PRJNA484127 | 34805 | 247 | 0.896552 | 2.21448344 | Endolimax piscium | 1284676 | Evosea | other_Eukaryota | 327 | 3.31e-85 | NTclustered | gi|443299289|gb|JX101954.1| | 1284676 | g34656 | i0 | 90.476 | 49.4534412955466 | 252 | 18 | 100 | 4 | 1 | 247 | 2949 | 2699 | Endolimax piscium clone PM1 18S ribosomal RNA gene, partial sequence | blastn | 12215 | 327 | 1 | Eukaryota | Amoebozoa | Evosea | Mastigamoebida | Entamoebidae | Endolimax | Endolimax piscium | |||
| 17025737 | 17025737 | PRJNA484127_P_NODE_22834_length_280_cov_1.507246_g22685_i0 | PRJNA484127 | 22834 | 280 | 1.507246 | 4.2202888 | Endolimax piscium | 1284676 | Evosea | other_Eukaryota | 259 | 1.42e-64 | NTclustered | gi|443299289|gb|JX101954.1| | 1284676 | g22685 | i0 | 85.944 | 36.6892857142857 | 249 | 27 | 87 | 7 | 37 | 279 | 1883 | 2129 | Endolimax piscium clone PM1 18S ribosomal RNA gene, partial sequence | blastn | 10273 | 259 | 1 | Eukaryota | Amoebozoa | Evosea | Mastigamoebida | Entamoebidae | Endolimax | Endolimax piscium | |||
| 19574055 | 19574055 | PRJNA484127_P_NODE_12336_length_353_cov_1.125000_g12187_i0 | PRJNA484127 | 12336 | 353 | 1.125 | 3.97125 | Endolimax piscium | 1284676 | Evosea | other_Eukaryota | 412 | 1.3299999999999995e-110 | NTclustered | gi|443299289|gb|JX101954.1| | 1284676 | g12187 | i0 | 93.262 | 4.10198300283286 | 282 | 15 | 99 | 3 | 2 | 279 | 1153 | 1434 | Endolimax piscium clone PM1 18S ribosomal RNA gene, partial sequence | blastn | 1448 | 412 | 1 | Eukaryota | Amoebozoa | Evosea | Mastigamoebida | Entamoebidae | Endolimax | Endolimax piscium | |||
| 23400537 | 23400537 | PRJNA484127_P_NODE_10099_length_382_cov_0.854369_g9950_i0 | PRJNA484127 | 10099 | 382 | 0.854369 | 3.26368958 | Dictyostelium discoideum | 44689 | Evosea | other_Eukaryota | 429 | 1.44e-115 | NTclustered | gi|66826666|ref|XM_641596.1| | 352472 | g9950 | i0 | 87.467 | 99.2225130890052 | 375 | 43 | 98 | 4 | 10 | 382 | 513 | 141 | Dictyostelium discoideum AX4 hypothetical protein (act8) mRNA, complete cds | blastn | 37903 | 429 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium discoideum |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;