RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA484127" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA484127 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3648444 3648444 PRJNA484127_P_NODE_34763_length_247_cov_0.896552_g34614_i0 PRJNA484127 34763 247 0.896552 2.21448344 Metazoa 33208 Annelida Annelida 52.8 0.022   NTclustered gi|2918369720|emb|OZ237792.1| 311461 g34614 i0 100 0.226720647773279 28 0 11 0 104 131 7843211 7843184 Hirudo verbana genome assembly, chromosome: 14 blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
4275519 4275519 PRJNA484127_P_NODE_24224_length_274_cov_1.184080_g24075_i0 PRJNA484127 24224 274 1.18408 3.2443792 Ailoscolex lacteospumosus 1046305 Annelida Annelida 150 8.68e-32   NTclustered gi|2920003623|emb|OZ238873.1| 1046305 g24075 i0 80.612 31.2445255474453 196 36 71 2 79 273 9700155 9699961 Ailoscolex lacteospumosus genome assembly, chromosome: 14 blastn 8561 150 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
8101619 8101619 PRJNA484127_P_NODE_26267_length_265_cov_1.625000_g26118_i0 PRJNA484127 26267 265 1.625 4.30625 Ailoscolex lacteospumosus 1046305 Annelida Annelida 75 5.17e-9   NTclustered gi|2920003508|emb|OZ238866.1| 1046305 g26118 i0 97.674 8.59622641509434 43 1 16 0 11 53 10525273 10525315 Ailoscolex lacteospumosus genome assembly, chromosome: 7 blastn 2278 75 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
10025603 10025603 PRJNA484127_P_NODE_27208_length_261_cov_4.085106_g27059_i0 PRJNA484127 27208 261 4.085106 10.66212666 Haemadipsidae 27387 Annelida Annelida 137 6.39e-28   NTclustered gi|316927165|gb|HQ203119.1| 933824 g27059 i0 77.481 98.0306513409962 262 38 99 12 1 259 1325 1082 Domanibdella palmyrae isolate APY 28S ribosomal RNA gene, partial sequence blastn 25586 137 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Haemadipsidae Domanibdella Domanibdella palmyrae
15751036 15751036 PRJNA484127_P_NODE_17213_length_312_cov_1.175732_g17064_i0 PRJNA484127 17213 312 1.175732 3.66828384 Ailoscolex lacteospumosus 1046305 Annelida Annelida 62.1 4.85e-5   NTclustered gi|2920003651|emb|OZ238876.1| 1046305 g17064 i0 100 0.246794871794872 33 0 11 0 95 127 14750363 14750331 Ailoscolex lacteospumosus genome assembly, chromosome: 17 blastn 77 62.1 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
18948787 18948787 PRJNA484127_P_NODE_17095_length_312_cov_3.167364_g16946_i0 PRJNA484127 17095 312 3.167364 9.88217568 Opisthokonta 33154 Annelida Annelida 292 1.58e-74   NTclustered gi|322367326|gb|HQ121511.1| 341668 g16946 i0 83.934 98.7339743589744 305 49 98 0 7 311 450 146 Phragmatopoma lapidosa 40s ribosomal S14-like protein mRNA, complete cds blastn 30805 292 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Sabellariidae Phragmatopoma Phragmatopoma lapidosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;