RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA484127" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJNA484127 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9376149 9376149 PRJNA484127_P_NODE_15688_length_323_cov_1.248000_g15539_i0 PRJNA484127 15688 323 1.248 4.03104 Halobacterium litoreum 2039234 Archaea Archaea 52.8 0.03   NTclustered gi|2168234898|gb|CP089466.1| 2039234 g15539 i0 100 0.086687306501548 28 0 9 0 174 201 1876998 1877025 Halobacterium litoreum strain ZS-54-S2 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium litoreum
14477428 14477428 PRJNA484127_P_NODE_8552_length_407_cov_1.209581_g8403_i0 PRJNA484127 8552 407 1.209581 4.92299467 Haloterrigena salinisoli 3132747 Archaea Archaea 54.7 0.011   NTclustered gi|2706837818|gb|CP149787.1| 3132747 g8403 i0 90.244 0.179361179361179 41 4 10 0 231 271 511637 511597 Haloterrigena salinisoli strain KLK7 chromosome, complete genome blastn 73 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Haloterrigena Haloterrigena salinisoli

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;