RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA482207" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA482207 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6825531 6825531 PRJNA482207_P_NODE_21306_length_249_cov_1.619318_g21196_i0 PRJNA482207 21306 249 1.619318 4.03210182 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.023   NTclustered gi|149394719|gb|EF125701.1| 151077 g21196 i0 100 0.112449799196787 28 0 11 0 222 249 49 22 Chilodonella uncinata strain ATCC 50194 amidase-like gene, complete sequence; macronuclear blastn 28 52.8 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
20849583 20849583 PRJNA482207_P_NODE_22917_length_248_cov_0.880000_g22807_i0 PRJNA482207 22917 248 0.88 2.1824 Moneuplotes crassus 5936 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|74039759|gb|DQ114962.1| 5936 g22807 i0 100 0.116935483870968 29 0 12 0 220 248 37 9 Moneuplotes crassus clone pEC14 putative MORN repeat protein (pEC14) gene, complete cds; macronuclear blastn 29 54.7 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;