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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA478247" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA478247 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2998489 2998489 PRJNA478247_P_NODE_1063_length_391_cov_3.378453_g957_i0 PRJNA478247 1063 391 3.378453 13.20975123 Euglena gracilis 3039 Euglenozoa other_Eukaryota 433 1.1399999999999996e-116   NTclustered gi|13661266|gb|AF182553.1|AF182553 3039 g957 i0 88.515 113.539641943734 357 41 91 0 35 391 1375 1019 Euglena gracilis alpha-tubulin mRNA, complete cds blastn 44394 433 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
2998493 2998493 PRJNA478247_P_NODE_2183_length_230_cov_2.736318_g2077_i0 PRJNA478247 2183 230 2.736318 6.2935314 Entosiphon sp. 1921133 Euglenozoa other_Eukaryota 97.1 9.35e-16   NTclustered gi|1547024950|gb|MK213406.1| 1921133 g2077 i0 82.301 1.97826086956522 113 18 49 2 1 113 88 198 Entosiphon sp. strain ESC small subunit ribosomal RNA, partial sequence blastn 455 97.1 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sp.
2998497 2998497 PRJNA478247_P_NODE_3083_length_173_cov_1.500000_g2977_i0 PRJNA478247 3083 173 1.5 2.595 Trypanosoma grayi 71804 Euglenozoa other_Eukaryota 115 1.8300000000000003e-21   NTclustered gi|686636082|ref|XM_009312212.1| 71804 g2977 i0 81.752 0.791907514450867 137 25 79 0 5 141 166 302 Trypanosoma grayi ADP-ribosylation factor 1 partial mRNA blastn 137 115 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
6200278 6200278 PRJNA478247_P_NODE_1725_length_275_cov_2.182927_g1619_i0 PRJNA478247 1725 275 2.182927 6.00304925 Leishmania 5658 Euglenozoa other_Eukaryota 171 6.69e-38   NTclustered gi|2785808589|ref|XM_067203454.1| 2249476 g1619 i0 87.671 19.9418181818182 146 18 53 0 5 150 257 112 Leishmania orientalis uncharacterized protein (LSCM4_01400), partial mRNA blastn 5484 171 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania orientalis
13850779 13850779 PRJNA478247_P_NODE_3451_length_157_cov_1.968750_g3345_i0 PRJNA478247 3451 157 1.96875 3.0909375 Entosiphon 101492 Euglenozoa other_Eukaryota 213 5.62e-51   NTclustered gi|37542663|gb|AY061999.1| 101493 g3345 i0 92.568 7.43312101910828 148 11 94 0 10 157 1712 1565 Entosiphon sulcatum small subunit ribosomal RNA gene, partial sequence blastn 1167 213 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sulcatum
21499001 21499001 PRJNA478247_P_NODE_2957_length_180_cov_2.013245_g2851_i0 PRJNA478247 2957 180 2.013245 3.623841 Entosiphon 101492 Euglenozoa other_Eukaryota 134 5.3e-27   NTclustered gi|37542663|gb|AY061999.1| 101493 g2851 i0 81.111 24.2777777777778 180 22 100 6 1 180 1343 1510 Entosiphon sulcatum small subunit ribosomal RNA gene, partial sequence blastn 4370 134 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sulcatum
24673861 24673861 PRJNA478247_P_NODE_140_length_1235_cov_2.885572_g100_i0 PRJNA478247 140 1235 2.885572 35.6368142 Entosiphon sulcatum 101493 Euglenozoa other_Eukaryota 641 5.8799999999999996e-179   NTclustered gi|110589650|gb|DQ683347.1| 101493 g100 i0 80 39.2372469635628 860 160 70 8 377 1235 346 1194 Entosiphon sulcatum Hsp90 gene, partial cds blastn 48458 641 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sulcatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;