contig_metadata
7 rows where analysis = "blastn", bioproject = "PRJNA478247" and tax_kingdom = "Pseudomonadati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 447836 | 447836 | PRJNA478247_P_NODE_881_length_442_cov_3.670702_g776_i0 | PRJNA478247 | 881 | 442 | 3.670702 | 16.22450284 | Caldimonas aquatica | 376175 | Bacteria | Bacteria | 412 | 1.6999999999999998e-110 | NTclustered | gi|2325778792|gb|CP110257.1| | 376175 | g776 | i0 | 96.761 | 206.692307692308 | 247 | 8 | 98 | 0 | 1 | 247 | 2127141 | 2127387 | Caldimonas aquatica strain LMG 23380 chromosome, complete genome | blastn | 91358 | 412 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Caldimonas | Caldimonas aquatica | ||
| 1722519 | 1722519 | PRJNA478247_P_NODE_1162_length_366_cov_3.163205_g1056_i0 | PRJNA478247 | 1162 | 366 | 3.163205 | 11.5773303 | Ehrlichia ruminantium | 779 | Bacteria | Bacteria | 52.8 | 0.035 | NTclustered | gi|58416339|emb|CR925677.1| | 302409 | g1056 | i0 | 100 | 0.0765027322404372 | 28 | 0 | 8 | 0 | 82 | 109 | 1307643 | 1307670 | Ehrlichia ruminantium str. Gardel, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rickettsiales | Anaplasmataceae | Ehrlichia | Ehrlichia ruminantium | ||
| 10651463 | 10651463 | PRJNA478247_P_NODE_3129_length_171_cov_1.922535_g3023_i0 | PRJNA478247 | 3129 | 171 | 1.922535 | 3.28753485 | Temperatibacter marinus | 1456591 | Bacteria | Bacteria | 193 | 8.089999999999999e-45 | NTclustered | gi|2578886475|gb|CP123872.1| | 1456591 | g3023 | i0 | 95.082 | 480.426900584795 | 122 | 6 | 71 | 0 | 50 | 171 | 1655784 | 1655663 | Temperatibacter marinus strain NBRC 110045 chromosome, complete genome | blastn | 82153 | 193 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Kordiimonadales | Temperatibacteraceae | Temperatibacter | Temperatibacter marinus | ||
| 11300378 | 11300378 | PRJNA478247_P_NODE_2449_length_211_cov_3.626374_g2343_i0 | PRJNA478247 | 2449 | 211 | 3.626374 | 7.65164914 | Massilia | 149698 | Bacteria | Bacteria | 300 | 5.99e-77 | NTclustered | gi|1888689060|gb|CP050454.1| | 2709302 | g2343 | i0 | 96.667 | 235.672985781991 | 180 | 6 | 85 | 0 | 1 | 180 | 362599 | 362778 | Massilia sp. Dwa41.01b chromosome, complete genome | blastn | 49727 | 300 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Massilia | Massilia sp. Dwa41.01b | ||
| 15125104 | 15125104 | PRJNA478247_P_NODE_3212_length_166_cov_2.649635_g3106_i0 | PRJNA478247 | 3212 | 166 | 2.649635 | 4.3983941 | Burkholderiaceae | 119060 | Bacteria | Bacteria | 307 | 2.69e-79 | NTclustered | gi|532578729|gb|KC188318.1| | 305 | g3106 | i0 | 100 | 209 | 166 | 0 | 100 | 0 | 1 | 166 | 764 | 929 | Ralstonia solanacearum strain CFBP 3059 23S ribosomal RNA gene, partial sequence | blastn | 34694 | 307 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia solanacearum | ||
| 20223501 | 20223501 | PRJNA478247_P_NODE_976_length_415_cov_2.562176_g870_i0 | PRJNA478247 | 976 | 415 | 2.562176 | 10.6330304 | Hymenobacter | 89966 | Bacteria | Bacteria | 593 | 5.289999999999998e-165 | NTclustered | gi|2423912131|gb|CP115396.1| | 748197 | g870 | i0 | 92.548 | 372.865060240964 | 416 | 28 | 100 | 3 | 1 | 415 | 2575073 | 2575486 | Hymenobacter yonginensis strain KCTC 22745 chromosome, complete genome | blastn | 154739 | 593 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Hymenobacter | Hymenobacter yonginensis | |
| 24673864 | 24673864 | PRJNA478247_P_NODE_3440_length_157_cov_2.921875_g3334_i0 | PRJNA478247 | 3440 | 157 | 2.921875 | 4.58734375 | Caldimonas aquatica | 376175 | Bacteria | Bacteria | 291 | 2.52e-74 | NTclustered | gi|2325778792|gb|CP110257.1| | 376175 | g3334 | i0 | 100 | 205.152866242038 | 157 | 0 | 100 | 0 | 1 | 157 | 2127169 | 2127013 | Caldimonas aquatica strain LMG 23380 chromosome, complete genome | blastn | 32209 | 291 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Caldimonas | Caldimonas aquatica |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;