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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA474911" and tax_phylum = "Streptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Streptophyta · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA474911 · 13 ✖

analysis 1

  • blastn · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1097069 1097069 PRJNA474911_P_NODE_2901_length_357_cov_3.783784_g2775_i0 PRJNA474911 2901 357 3.783784 13.50810888 Arachis 3817 Plants Plants 654 0   NTclustered gi|1666234238|ref|XR_003816680.1| 3818 g2775 i0 99.721 100.280112044818 358 0 100 1 1 357 2197 1840 PREDICTED: Arachis hypogaea 28S ribosomal RNA (LOC114926237), rRNA blastn 35800 654 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Arachis Arachis hypogaea
1722394 1722394 PRJNA474911_P_NODE_6022_length_228_cov_8.473054_g5895_i0 PRJNA474911 6022 228 8.473054 19.31856312 Solanum tuberosum 4113 Plants Plants 422 1.34e-113   NTclustered gi|971579642|ref|XR_001471816.1| 4113 g5895 i0 100 100 228 0 100 0 1 228 42 269 PREDICTED: Solanum tuberosum uncharacterized LOC107058159 (LOC107058159), ncRNA blastn 22800 422 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum tuberosum
2372558 2372558 PRJNA474911_P_NODE_2522_length_389_cov_4.402439_g2396_i0 PRJNA474911 2522 389 4.402439 17.12548771 Magnoliopsida 3398 Plants Plants 691 0   NTclustered gi|2839189697|ref|XR_011219724.1| 4081 g2396 i0 98.715 1132.23136246787 389 5 100 0 1 389 1870 1482 PREDICTED: Solanum lycopersicum 28S ribosomal RNA (LOC138347010), rRNA blastn 440438 697 0.991391678622669 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum lycopersicum
2998367 2998367 PRJNA474911_P_NODE_7943_length_203_cov_0.901408_g7816_i0 PRJNA474911 7943 203 0.901408 1.82985824 Lolium rigidum 89674 Plants Plants 370 4.3e-98   NTclustered gi|2212483262|ref|XM_047224862.1| 89674 g7816 i0 99.507 6 203 1 100 0 1 203 601 803 PREDICTED: Lolium rigidum disease resistance protein RGA2-like (LOC124691572), transcript variant X6, mRNA blastn 1218 370 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Lolium Lolium rigidum
3648205 3648205 PRJNA474911_P_NODE_3603_length_313_cov_8.873016_g3477_i0 PRJNA474911 3603 313 8.873016 27.77254008 Eukaryota 2759 Plants Plants 579 1.0899999999999999e-160   NTclustered gi|2217019617|ref|XR_007051663.1| 4072 g3477 i0 100 101 313 0 100 0 1 313 733 1045 PREDICTED: Capsicum annuum 18S ribosomal RNA (LOC124895330), rRNA blastn 31613 579 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Capsicum Capsicum annuum
4925221 4925221 PRJNA474911_P_NODE_6844_length_211_cov_1.280000_g6717_i0 PRJNA474911 6844 211 1.28 2.7008 Eukaryota 2759 Plants Plants 58.4 3.98e-4   NTclustered gi|1063459948|ref|XM_018118745.1| 3641 g6717 i0 100 32.6255924170616 31 0 15 0 178 208 1681 1711 PREDICTED: Theobroma cacao uncharacterized CRM domain-containing protein At3g25440, chloroplastic (LOC18612619), transcript variant X1, mRNA blastn 6884 58.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Malvaceae Theobroma Theobroma cacao
11300311 11300311 PRJNA474911_P_NODE_5869_length_232_cov_2.695906_g5742_i0 PRJNA474911 5869 232 2.695906 6.25450192 Solanum 4107 Plants Plants 429 8.2e-116   NTclustered gi|2839189697|ref|XR_011219724.1| 4081 g5742 i0 100 100 232 0 100 0 1 232 2646 2415 PREDICTED: Solanum lycopersicum 28S ribosomal RNA (LOC138347010), rRNA blastn 23200 429 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum lycopersicum
12576055 12576055 PRJNA474911_P_NODE_6870_length_210_cov_9.134228_g6743_i0 PRJNA474911 6870 210 9.134228 19.1818788 Magnoliopsida 3398 Plants Plants 385 1.5999999999999995e-102   NTclustered gi|2646016675|ref|XR_009883389.1| 3486 g6743 i0 100 99.0571428571429 208 0 99 0 1 208 1435 1642 PREDICTED: Humulus lupulus 18S ribosomal RNA (LOC133811861), rRNA blastn 20802 388 0.992268041237113 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Humulus Humulus lupulus
12576058 12576058 PRJNA474911_P_NODE_7570_length_205_cov_1.555556_g7443_i0 PRJNA474911 7570 205 1.555556 3.1888898 Magnoliopsida 3398 Plants Plants 379 7.229999999999999e-101   NTclustered gi|1502965506|gb|MH603429.1| 4634 g7443 i0 100 195 205 0 100 0 1 205 110175 110379 Monocostus uniflorus voucher Zomlefer et al 2337 (FTG, GA, NY) isolate 2000-894H plastid, partial genome blastn 39975 379 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Zingiberales Costaceae Monocostus Monocostus uniflorus
15125022 15125022 PRJNA474911_P_NODE_5392_length_244_cov_2.098361_g5265_i0 PRJNA474911 5392 244 2.098361 5.12000084 Myrtaceae 3931 Plants Plants 54.7 0.006   NTclustered gi|2577862750|ref|NC_082025.1| 178175 g5265 i0 100 4.86885245901639 29 0 12 0 25 53 9330 9302 Syzygium australe chloroplast, complete genome blastn 1188 54.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Myrtales Myrtaceae Syzygium Syzygium australe
16399661 16399661 PRJNA474911_P_NODE_7473_length_206_cov_0.882759_g7346_i0 PRJNA474911 7473 206 0.882759 1.81848354 Poaceae 4479 Plants Plants 52.8 0.018   NTclustered gi|1897958810|ref|XR_004853261.1| 4577 g7346 i0 100 0.679611650485437 28 0 14 0 152 179 182 209 PREDICTED: Zea mays uncharacterized lncRNA (LOC118473579), transcript variant X2, ncRNA blastn 140 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Zea Zea mays
22124082 22124082 PRJNA474911_P_NODE_2818_length_365_cov_2.855263_g2692_i0 PRJNA474911 2818 365 2.855263 10.42170995 Medicago truncatula 3880 Plants Plants 52.8 0.035   NTclustered gi|164498918|gb|AC183430.31| 3880 g2692 i0 100 0.23013698630137 28 0 8 0 125 152 89972 89999 Medicago truncatula chromosome 8 clone mth2-176i20, complete sequence blastn 84 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Medicago Medicago truncatula
23399871 23399871 PRJNA474911_P_NODE_4159_length_286_cov_1.133333_g4032_i0 PRJNA474911 4159 286 1.133333 3.24133238 Cucumis sativus 3659 Plants Plants 228 4.0899999999999984e-55   NTclustered gi|1784860984|ref|XM_004138916.3| 3659 g4032 i0 88.021 66.8986013986014 192 23 67 0 1 192 1038 847 PREDICTED: Cucumis sativus elongation factor 1-alpha (EF1), mRNA blastn 19133 228 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Cucumis Cucumis sativus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;