RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA474426" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

tax_kingdom 1

bioproject 1

  • PRJNA474426 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5551196 5551196 PRJNA474426_P_NODE_36245_length_162_cov_1.442478_g36040_i0 PRJNA474426 36245 162 1.442478 2.33681436 uncultured archaeon 115547 Archaea Archaea 86.1 1.33e-12   NTclustered gi|765560216|gb|KP308717.1| 115547 g36040 i0 84.884 0.530864197530864 86 12 53 1 66 151 8328 8244 Uncultured archaeon clone gwa2_scaffold_39027 genomic sequence blastn 86 86.1 1 Archaea               uncultured archaeon
20849044 20849044 PRJNA474426_P_NODE_14077_length_278_cov_1.816594_g13872_i0 PRJNA474426 14077 278 1.816594 5.05013132 uncultured Candidatus Methanogranum sp. 2093355 Archaea Archaea 412 1.0199999999999999e-110   NTclustered gi|2621784480|emb|OY780938.1| 2093355 g13872 i0 93.502 1.99280575539568 277 18 99 0 1 277 1307016 1307292 MAG: uncultured Candidatus Methanogranum sp. isolate 9d90576e-3f35-4afd-8682-ecdb60e67c32 genome assembly, chromosome: 1 blastn 554 412 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae Candidatus Methanogranum uncultured Candidatus Methanogranum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;