RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA474426" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA474426 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5551111 5551111 PRJNA474426_P_NODE_22685_length_207_cov_2.683544_g22480_i0 PRJNA474426 22685 207 2.683544 5.55493608 Candidatus Saccharibacteria bacterium TM7i 2980174 Bacteria Bacteria 296 7.58e-76   NTclustered gi|2306681518|gb|CP075337.1| 2980174 g22480 i0 93.5 66.7391304347826 200 12 97 1 8 207 665719 665521 Candidatus Saccharibacteria bacterium TM7i chromosome, complete genome blastn 13815 296 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium TM7i
20849153 20849153 PRJNA474426_P_NODE_33577_length_166_cov_0.880342_g33372_i0 PRJNA474426 33577 166 0.880342 1.46136772 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 248 1.65e-61   NTclustered gi|1958073143|gb|CP064993.1| 2026720 g33372 i0 96.644 15.4156626506024 149 5 90 0 1 149 156332 156184 Candidatus Saccharibacteria bacterium isolate Hirt_18-Q3-R61-65_MAXAC.330_cln chromosome, complete genome blastn 2559 248 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
24048841 24048841 PRJNA474426_P_NODE_28519_length_181_cov_1.015152_g28314_i0 PRJNA474426 28519 181 1.015152 1.83742512 Bacteria 2 Bacteria Bacteria 281 1.8e-71   NTclustered gi|1958075319|gb|CP064995.1| 2026720 g28314 i0 96.491 292.292817679558 171 5 94 1 11 181 692202 692371 Candidatus Saccharibacteria bacterium isolate Hjor_18-Q3-R7-51_MAXAC.102_uni chromosome, complete genome blastn 52905 283 0.992932862190813 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;