RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA474426" and tax_kingdom = "Shotokuvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Shotokuvirae · 2 ✖

bioproject 1

  • PRJNA474426 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16399575 16399575 PRJNA474426_P_NODE_6553_length_423_cov_2.069519_g6350_i0 PRJNA474426 6553 423 2.069519 8.75406537 Viruses 10239 Viruses Viruses 750 0   NTclustered gi|2089355977|gb|MZ364300.1| 2748378 g6350 i0 99.756 6.14657210401891 409 1 97 0 1 409 257 665 CRESS virus sp. strain CRESS-2/S10/AUS, complete sequence blastn 2600 750 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
17024735 17024735 PRJNA474426_P_NODE_20814_length_218_cov_2.763314_g20609_i0 PRJNA474426 20814 218 2.763314 6.02402452 Psittacidae aveparvovirus 2794556 Viruses Viruses 248 2.29e-61   NTclustered gi|2015372674|gb|MW046380.1| 2794556 g20609 i0 87.215 1.0045871559633 219 26 100 2 1 218 1536 1753 MAG: Psittacidae aveparvovirus isolate fmg67par043 genomic sequence, sequence blastn 219 248 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Aveparvovirus Psittacidae aveparvovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;