RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA474426" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 4 ✖

bioproject 1

  • PRJNA474426 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6825004 6825004 PRJNA474426_P_NODE_15006_length_267_cov_3.509174_g14801_i0 PRJNA474426 15006 267 3.509174 9.36949458 Pleurocapsa sp. FMAR1 3040204 Bacteria Bacteria 259 1.34e-64   NTclustered gi|2621703423|emb|OY762512.1| 3040204 g14801 i0 97.987 97.5168539325843 149 3 95 0 112 260 3668570 3668718 Pleurocapsa sp. FMAR1 isolate 44838 genome assembly, chromosome: 1 blastn 26037 259 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Pleurocapsales Hyellaceae Pleurocapsa Pleurocapsa sp. FMAR1
18948458 18948458 PRJNA474426_P_NODE_35895_length_163_cov_0.894737_g35690_i0 PRJNA474426 35895 163 0.894737 1.45842131 Nostocales 1161 Bacteria Bacteria 60.2 8.12e-5   NTclustered gi|930349143|gb|CP012036.1| 224013 g35690 i0 100 11.4478527607362 32 0 20 0 15 46 6130802 6130771 Nostoc piscinale CENA21 chromosome blastn 1866 60.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Nostoc Nostoc piscinale
19573273 19573273 PRJNA474426_P_NODE_28156_length_182_cov_1.563910_g27951_i0 PRJNA474426 28156 182 1.56391 2.8463162 Candidatus Melainabacteria bacterium MEL.A1 1899017 Bacteria Bacteria 219 1.44e-52   NTclustered gi|1079475020|gb|CP017245.1| 1899017 g27951 i0 88.398 5.80769230769231 181 21 99 0 2 182 740580 740760 Candidatus Melainabacteria bacterium MEL.A1 chromosome, complete genome blastn 1057 219 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium MEL.A1
21498667 21498667 PRJNA474426_P_NODE_16057_length_256_cov_2.323671_g15852_i0 PRJNA474426 16057 256 2.323671 5.94859776 Microcystis 1125 Bacteria Bacteria 307 4.5e-79   NTclustered gi|1519305953|dbj|AP019314.1| 213615 g15852 i0 98.837 58.06640625 172 2 67 0 85 256 433468 433639 Microcystis viridis NIES-102 DNA, complete genome blastn 14865 307 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Microcystaceae Microcystis Microcystis viridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;