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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA473824" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 15 ✖

tax_kingdom 1

bioproject 1

  • PRJNA473824 · 15 ✖

analysis 1

  • blastn · 15 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2997081 2997081 PRJNA473824_P_NODE_140743_length_151_cov_5.438596_g140105_i0 PRJNA473824 140743 151 5.438596 8.21227996 Nannocystis punicea 2995304 Bacteria Bacteria 60.2 7.36e-5   NTclustered gi|2415023655|gb|CP114040.1| 2995304 g140105 i0 89.362 0.311258278145695 47 5 31 0 105 151 5258114 5258068 Nannocystis poenicansa strain FL3 chromosome, complete genome blastn 47 60.2 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Nannocystis Nannocystis punicea
2997828 2997828 PRJNA473824_P_NODE_55063_length_173_cov_5.772059_g54425_i0 PRJNA473824 55063 173 5.772059 9.98566207 Sorangium cellulosum 56 Bacteria Bacteria 54.7 0.004   NTclustered gi|1338588479|gb|CP012673.1| 56 g54425 i0 96.97 0.190751445086705 33 0 18 1 141 172 12067971 12067939 Sorangium cellulosum strain So ce26 chromosome, complete genome blastn 33 54.7 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Sorangium Sorangium cellulosum
3647885 3647885 PRJNA473824_P_NODE_97403_length_173_cov_2.823529_g96765_i0 PRJNA473824 97403 173 2.823529 4.88470517 Archangiaceae 39 Bacteria Bacteria 100 5.12e-17   NTclustered gi|2579656172|gb|CP043491.1| 43 g96765 i0 90.667 3.2485549132948 75 7 43 0 1 75 9940044 9939970 Cystobacter fuscus strain Cbf 10 chromosome, complete genome blastn 562 100 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Cystobacter Cystobacter fuscus
4273474 4273474 PRJNA473824_P_NODE_15504_length_303_cov_3.759398_g14867_i0 PRJNA473824 15504 303 3.759398 11.39097594 Archangium violaceum 83451 Bacteria Bacteria 305 1.96e-78   NTclustered gi|1985695619|gb|CP069396.1| 83451 g14867 i0 84.918 23.980198019802 305 42 100 4 1 303 931560 931258 Archangium violaceum strain SDU8 chromosome, complete genome blastn 7266 305 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium violaceum
6824096 6824096 PRJNA473824_P_NODE_146426_length_151_cov_4.175439_g145788_i0 PRJNA473824 146426 151 4.175439 6.30491289 Pendulispora brunnea 2905690 Bacteria Bacteria 67.6 4.4e-7   NTclustered gi|2698055994|gb|CP089982.1| 2905690 g145788 i0 93.333 24.4569536423841 45 3 30 0 29 73 1416 1372 Pendulispora brunnea strain MSr12523 chromosome, complete genome blastn 3693 67.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora brunnea
13200677 13200677 PRJNA473824_P_NODE_46711_length_180_cov_2.496503_g46073_i0 PRJNA473824 46711 180 2.496503 4.4937054 Labilithrix luteola 1391654 Bacteria Bacteria 272 1.08e-68   NTclustered gi|913610804|gb|CP012333.1| 1391654 g46073 i0 93.889 181.072222222222 180 11 100 0 1 180 3942294 3942115 Labilithrix luteola strain DSM 27648, complete genome blastn 32593 272 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
14474973 14474973 PRJNA473824_P_NODE_143672_length_151_cov_4.622807_g143034_i0 PRJNA473824 143672 151 4.622807 6.98043857 Archangium violaceum 83451 Bacteria Bacteria 60.2 7.36e-5   NTclustered gi|1985695619|gb|CP069396.1| 83451 g143034 i0 92.683 0.271523178807947 41 3 27 0 92 132 7089457 7089497 Archangium violaceum strain SDU8 chromosome, complete genome blastn 41 60.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium violaceum
14475568 14475568 PRJNA473824_P_NODE_45312_length_182_cov_3.289655_g44674_i0 PRJNA473824 45312 182 3.289655 5.9871721 Pendulispora brunnea 2905690 Bacteria Bacteria 65.8 1.99e-6   NTclustered gi|2698055994|gb|CP089982.1| 2905690 g44674 i0 97.368 0.208791208791209 38 1 21 0 145 182 10138665 10138628 Pendulispora brunnea strain MSr12523 chromosome, complete genome blastn 38 65.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora brunnea
16399189 16399189 PRJNA473824_P_NODE_55573_length_173_cov_5.639706_g54935_i0 PRJNA473824 55573 173 5.639706 9.75669138 Myxococcales 29 Bacteria Bacteria 71.3 4.01e-8   NTclustered gi|2869653495|gb|CP175551.1| 33 g54935 i0 97.561 9.47976878612717 41 1 24 0 1 41 4197684 4197724 Myxococcus fulvus strain KYC1117 chromosome, complete genome blastn 1640 71.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Myxococcus Myxococcus fulvus
19573078 19573078 PRJNA473824_P_NODE_81936_length_173_cov_3.316176_g81298_i0 PRJNA473824 81936 173 3.316176 5.73698448 Corallococcus exercitus 2316736 Bacteria Bacteria 65.8 1.87e-6   NTclustered gi|2809270164|gb|CP102577.1| 2316736 g81298 i0 97.368 0.219653179190751 38 1 22 0 3 40 8672086 8672049 Corallococcus exercitus strain SDU142 chromosome, complete genome blastn 38 65.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Corallococcus Corallococcus exercitus
22773646 22773646 PRJNA473824_P_NODE_73438_length_173_cov_3.713235_g72800_i0 PRJNA473824 73438 173 3.713235 6.42389655 Pseudomonadati 3379134 Bacteria Bacteria 62.1 2.41e-5   NTclustered gi|262076673|gb|CP001804.1| 502025 g72800 i0 86.667 1.09248554913295 60 2 33 5 13 69 2953980 2954036 Haliangium ochraceum DSM 14365, complete genome blastn 189 62.1 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae Haliangium Haliangium ochraceum
23399033 23399033 PRJNA473824_P_NODE_27859_length_225_cov_2.063830_g27221_i0 PRJNA473824 27859 225 2.06383 4.6436175 Nannocystis punicea 2995304 Bacteria Bacteria 121 5.409999999999999e-23   NTclustered gi|2415023655|gb|CP114040.1| 2995304 g27221 i0 98.529 3.44 68 1 30 0 156 223 2589362 2589295 Nannocystis poenicansa strain FL3 chromosome, complete genome blastn 774 121 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Nannocystis Nannocystis punicea
23399156 23399156 PRJNA473824_P_NODE_36239_length_200_cov_4.030675_g35601_i0 PRJNA473824 36239 200 4.030675 8.06135 Archangium violaceum 83451 Bacteria Bacteria 158 3.58e-34   NTclustered gi|2579675135|gb|CP043493.1| 83451 g35601 i0 94.175 46.695 103 6 52 0 98 200 7364227 7364125 Archangium violaceum strain Cbvi 34 chromosome, complete genome blastn 9339 158 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium violaceum
24673467 24673467 PRJNA473824_P_NODE_9320_length_423_cov_1.720207_g8704_i0 PRJNA473824 9320 423 1.720207 7.27647561 Labilithrix luteola 1391654 Bacteria Bacteria 532 1.1899999999999996e-146   NTclustered gi|913610804|gb|CP012333.1| 1391654 g8704 i0 90.049 220.295508274232 412 40 97 1 1 412 3942541 3942951 Labilithrix luteola strain DSM 27648, complete genome blastn 93185 532 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
25322648 25322648 PRJNA473824_P_NODE_31800_length_212_cov_2.348571_g31162_i0 PRJNA473824 31800 212 2.348571 4.97897052 Pseudomonadati 3379134 Bacteria Bacteria 213 8.08e-51   NTclustered gi|2700865302|gb|CP147913.1| 83455 g31162 i0 87.5 93.5896226415094 184 23 87 0 29 212 1013825 1013642 Myxococcus stipitatus strain KYC2006 chromosome, complete genome blastn 19841 215 0.990697674418605 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Myxococcus Myxococcus stipitatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;