RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA473824" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA473824 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
446373 446373 PRJNA473824_P_NODE_130161_length_158_cov_0.958678_g129523_i0 PRJNA473824 130161 158 0.958678 1.51471124 Yellow silver pine associated botourmia-like virus 46 3066816 Viruses Viruses 169 1.24e-37   NTclustered gi|2626077041|gb|OQ987364.1| 3066816 g129523 i0 86.538 2.77848101265823 156 17 97 4 5 158 130 283 MAG: Yellow silver pine associated botourmia-like virus 46 isolate LEPINT genomic sequence blastn 439 169 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Yellow silver pine associated botourmia-like virus 46
4273371 4273371 PRJNA473824_P_NODE_1384_length_2546_cov_23586.354324_g1259_i0 PRJNA473824 1384 2546 23586.354324 600508.58108904 Narnavirus saccharominor 3431059 Viruses Viruses 4566 0   NTclustered gi|21557564|ref|NC_004051.1| 186772 g1259 i0 99.443 4.85545954438335 2514 14 99 0 17 2530 2514 1 Saccharomyces 20S RNA narnavirus, complete genome blastn 12362 4566 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus saccharominor
9374074 9374074 PRJNA473824_P_NODE_127848_length_161_cov_0.895161_g127210_i0 PRJNA473824 127848 161 0.895161 1.44120921 Ripachij virus 3130407 Viruses Viruses 246 5.7199999999999986e-61   NTclustered gi|2717319663|gb|PP172709.1| 3130407 g127210 i0 94.375 149.515527950311 160 9 99 0 1 160 447 606 MAG: Ripachij virus isolate KCAP1_k141_392510 genomic sequence blastn 24072 246 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripachij virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;