RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA473824" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA473824 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2372246 2372246 PRJNA473824_P_NODE_99722_length_173_cov_2.779412_g99084_i0 PRJNA473824 99722 173 2.779412 4.80838276 Bacteria 2 Bacteria Bacteria 75 3.1e-9   NTclustered gi|837350690|gb|CP011211.1| 1619070 g99084 i0 92.308 0.901734104046243 52 4 30 0 25 76 831219 831168 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 156 75 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
14475631 14475631 PRJNA473824_P_NODE_51292_length_174_cov_1.138686_g50654_i0 PRJNA473824 51292 174 1.138686 1.98131364 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 97.1 6.67e-16   NTclustered gi|1958002866|gb|CP064959.1| 2026720 g50654 i0 89.744 2.11494252873563 78 4 44 4 99 174 765872 765797 Candidatus Saccharibacteria bacterium isolate AalW_18-Q3-R10-53_BAT3C.508_uni chromosome, complete genome blastn 368 97.1 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
22122664 22122664 PRJNA473824_P_NODE_118618_length_172_cov_2.555556_g117980_i0 PRJNA473824 118618 172 2.555556 4.39555632 Candidatus Nanogingivalaceae bacterium 2725942 Bacteria Bacteria 187 3.79e-43   NTclustered gi|2070571752|gb|CP072208.2| 2725942 g117980 i0 84.884 3.43604651162791 172 17 100 1 1 172 469086 468924 MAG: Candidatus Nanogingivalaceae bacterium isolate JCVI_27_bin.3 chromosome, complete genome blastn 591 187 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Nanosyncoccalia Candidatus Nanogingivales Candidatus Nanogingivalaceae   Candidatus Nanogingivalaceae bacterium
22123567 22123567 PRJNA473824_P_NODE_51318_length_174_cov_1.131387_g50680_i0 PRJNA473824 51318 174 1.131387 1.96861338 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 294 2.1999999999999998e-75   NTclustered gi|1474570736|gb|CP023991.1| 2026720 g50680 i0 97.126 59.7241379310345 174 5 100 0 1 174 882660 882833 Candidatus Saccharibacteria bacterium isolate CG19_WC_8_21_14_NA_150_51_44 chromosome, complete genome blastn 10392 294 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;