contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA473824" and tax_phylum = "Acidobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 446725 | 446725 | PRJNA473824_P_NODE_20161_length_263_cov_2.539823_g19523_i0 | PRJNA473824 | 20161 | 263 | 2.539823 | 6.67973449 | Terriglobus roseus | 392734 | Bacteria | Bacteria | 470 | 5.59e-128 | NTclustered | gi|390410848|gb|CP003379.1| | 926566 | g19523 | i0 | 98.859 | 159.536121673004 | 263 | 3 | 100 | 0 | 1 | 263 | 928599 | 928337 | Terriglobus roseus DSM 18391, complete genome | blastn | 41958 | 470 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Terriglobus | Terriglobus roseus | ||
| 1721601 | 1721601 | PRJNA473824_P_NODE_29882_length_218_cov_1.508287_g29244_i0 | PRJNA473824 | 29882 | 218 | 1.508287 | 3.28806566 | Geothrix sp. | 1962974 | Bacteria | Bacteria | 54.7 | 0.005 | NTclustered | gi|2515262989|gb|CP126625.1| | 1962974 | g29244 | i0 | 96.875 | 0.146788990825688 | 32 | 1 | 15 | 0 | 177 | 208 | 1165154 | 1165123 | MAG: Geothrix sp. isolate L227-G1 chromosome, complete genome | blastn | 32 | 54.7 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Geothrix | Geothrix sp. | ||
| 2997747 | 2997747 | PRJNA473824_P_NODE_47763_length_178_cov_3.865248_g47125_i0 | PRJNA473824 | 47763 | 178 | 3.865248 | 6.88014144 | Geothrix sp. | 1962974 | Bacteria | Bacteria | 134 | 5.23e-27 | NTclustered | gi|2515262989|gb|CP126625.1| | 1962974 | g47125 | i0 | 82.099 | 4.90449438202247 | 162 | 23 | 89 | 6 | 20 | 178 | 198372 | 198530 | MAG: Geothrix sp. isolate L227-G1 chromosome, complete genome | blastn | 873 | 134 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Geothrix | Geothrix sp. | ||
| 4924607 | 4924607 | PRJNA473824_P_NODE_36024_length_201_cov_1.762195_g35386_i0 | PRJNA473824 | 36024 | 201 | 1.762195 | 3.54201195 | Edaphobacter | 388463 | Bacteria | Bacteria | 241 | 3.480000000000001e-59 | NTclustered | gi|112980859|gb|DQ829663.1| | 171953 | g35386 | i0 | 94.839 | 234.144278606965 | 155 | 6 | 77 | 2 | 48 | 201 | 1265 | 1112 | Uncultured Acidobacteria bacterium clone DON10 23S ribosomal RNA gene, partial sequence | blastn | 47063 | 241 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 5550875 | 5550875 | PRJNA473824_P_NODE_77885_length_173_cov_3.500000_g77247_i0 | PRJNA473824 | 77885 | 173 | 3.5 | 6.055 | Vicinamibacterales bacterium | 2910147 | Bacteria | Bacteria | 52.8 | 0.015 | NTclustered | gi|2621704042|emb|OY760734.1| | 2910147 | g77247 | i0 | 100 | 0.161849710982659 | 28 | 0 | 16 | 0 | 22 | 49 | 2936398 | 2936371 | MAG: Vicinamibacterales bacterium isolate 10b48155-431e-4809-9d43-759f23ff96f9 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium | ||||
| 6824763 | 6824763 | PRJNA473824_P_NODE_62326_length_173_cov_4.580882_g61688_i0 | PRJNA473824 | 62326 | 173 | 4.580882 | 7.92492586 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 63.9 | 6.71e-6 | NTclustered | gi|374851660|dbj|AP011695.1| | 171953 | g61688 | i0 | 93.023 | 0.855491329479769 | 43 | 3 | 25 | 0 | 131 | 173 | 15936 | 15894 | Uncultured Acidobacteria bacterium DNA, fosmid clone: JFF017_D01 | blastn | 148 | 63.9 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 10650992 | 10650992 | PRJNA473824_P_NODE_84989_length_173_cov_3.220588_g84351_i0 | PRJNA473824 | 84989 | 173 | 3.220588 | 5.57161724 | Granulicella mallensis | 940614 | Bacteria | Bacteria | 87.9 | 3.98e-13 | NTclustered | gi|358750971|gb|CP003130.1| | 682795 | g84351 | i0 | 88.732 | 3.01156069364162 | 71 | 8 | 41 | 0 | 6 | 76 | 4313672 | 4313742 | Granulicella mallensis MP5ACTX8 chromosome, complete genome | blastn | 521 | 87.9 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Granulicella | Granulicella mallensis | ||
| 11925047 | 11925047 | PRJNA473824_P_NODE_143850_length_151_cov_4.587719_g143212_i0 | PRJNA473824 | 143850 | 151 | 4.587719 | 6.92745569 | Geothrix sp. | 1962974 | Bacteria | Bacteria | 62.1 | 2.05e-5 | NTclustered | gi|2515262989|gb|CP126625.1| | 1962974 | g143212 | i0 | 85 | 0.649006622516556 | 60 | 9 | 40 | 0 | 78 | 137 | 2945534 | 2945475 | MAG: Geothrix sp. isolate L227-G1 chromosome, complete genome | blastn | 98 | 62.1 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Geothrix | Geothrix sp. | ||
| 13201011 | 13201011 | PRJNA473824_P_NODE_98351_length_173_cov_2.808824_g97713_i0 | PRJNA473824 | 98351 | 173 | 2.808824 | 4.85926552 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 111 | 2.36e-20 | NTclustered | gi|2874253862|emb|OY969918.1| | 171953 | g97713 | i0 | 93.333 | 0.433526011560694 | 75 | 5 | 43 | 0 | 99 | 173 | 3391199 | 3391125 | MAG: uncultured Acidobacteriota bacterium isolate MFD04967.bin.c.4 genome assembly, chromosome: 1 | blastn | 75 | 111 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 23398458 | 23398458 | PRJNA473824_P_NODE_123159_length_167_cov_1.546154_g122521_i0 | PRJNA473824 | 123159 | 167 | 1.546154 | 2.58207718 | Terriglobus roseus | 392734 | Bacteria | Bacteria | 276 | 7.64e-70 | NTclustered | gi|1085637902|emb|LT629690.1| | 392734 | g122521 | i0 | 96.407 | 96.8622754491018 | 167 | 6 | 100 | 0 | 1 | 167 | 4807170 | 4807004 | Terriglobus roseus strain GAS232 genome assembly, chromosome: I | blastn | 16176 | 276 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Terriglobus | Terriglobus roseus | ||
| 23399402 | 23399402 | PRJNA473824_P_NODE_60619_length_173_cov_4.772059_g59981_i0 | PRJNA473824 | 60619 | 173 | 4.772059 | 8.25566207 | Tunturiibacter empetritectus | 3069691 | Bacteria | Bacteria | 117 | 5.08e-22 | NTclustered | gi|2750692779|gb|CP132932.1| | 3069691 | g59981 | i0 | 97.101 | 39.3872832369942 | 69 | 2 | 40 | 0 | 8 | 76 | 2718650 | 2718582 | Tunturiibacter empetritectus strain M8UP23 chromosome | blastn | 6814 | 117 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Tunturiibacter | Tunturiibacter empetritectus | ||
| 24672928 | 24672928 | PRJNA473824_P_NODE_27900_length_224_cov_7.502674_g27262_i0 | PRJNA473824 | 27900 | 224 | 7.502674 | 16.80598976 | Vicinamibacterales bacterium | 2910147 | Bacteria | Bacteria | 87.9 | 5.46e-13 | NTclustered | gi|2814788339|emb|OY761475.2| | 2910147 | g27262 | i0 | 83 | 0.446428571428571 | 100 | 14 | 44 | 3 | 1 | 99 | 6006435 | 6006532 | MAG: Vicinamibacterales bacterium isolate 01def6b1-0c8c-435d-859a-076764f3ef92 genome assembly, chromosome: 1 | blastn | 100 | 87.9 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;