contig_metadata
19 rows where analysis = "blastn", bioproject = "PRJNA473799" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4272420 | 4272420 | PRJNA473799_P_NODE_16224_length_286_cov_2.718310_g15950_i0 | PRJNA473799 | 16224 | 286 | 2.71831 | 7.7743666 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 320 | 6.56e-83 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g15950 | i0 | 87.77 | 215.741258741259 | 278 | 29 | 96 | 5 | 12 | 286 | 1904478 | 1904753 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 61702 | 320 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 4272647 | 4272647 | PRJNA473799_P_NODE_32444_length_254_cov_2.607735_g32170_i0 | PRJNA473799 | 32444 | 254 | 2.607735 | 6.6236469 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 337 | 5.69e-88 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g32170 | i0 | 90.588 | 360.377952755906 | 255 | 23 | 100 | 1 | 1 | 254 | 1903864 | 1904118 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 91536 | 337 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 6823420 | 6823420 | PRJNA473799_P_NODE_39026_length_249_cov_0.875000_g38752_i0 | PRJNA473799 | 39026 | 249 | 0.875 | 2.17875 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 141 | 4.68e-29 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g38752 | i0 | 83.66 | 7.3293172690763 | 153 | 21 | 65 | 4 | 99 | 249 | 2400004 | 2399854 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 1825 | 141 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 8098482 | 8098482 | PRJNA473799_P_NODE_14727_length_290_cov_1.119816_g14453_i0 | PRJNA473799 | 14727 | 290 | 1.119816 | 3.2474664 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 250 | 8.87e-62 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g14453 | i0 | 86.667 | 1.56896551724138 | 225 | 30 | 78 | 0 | 3 | 227 | 2462871 | 2463095 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 455 | 250 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 8098697 | 8098697 | PRJNA473799_P_NODE_30627_length_258_cov_1.091892_g30353_i0 | PRJNA473799 | 30627 | 258 | 1.091892 | 2.81708136 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 250 | 7.76e-62 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g30353 | i0 | 93.976 | 2.94186046511628 | 166 | 9 | 64 | 1 | 1 | 165 | 3126099 | 3125934 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 759 | 250 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 9373416 | 9373416 | PRJNA473799_P_NODE_32508_length_254_cov_2.127072_g32234_i0 | PRJNA473799 | 32508 | 254 | 2.127072 | 5.40276288 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 283 | 7.51e-72 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g32234 | i0 | 90.278 | 2.08267716535433 | 216 | 21 | 85 | 0 | 1 | 216 | 2793225 | 2793010 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 529 | 283 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 10649151 | 10649151 | PRJNA473799_P_NODE_13349_length_297_cov_3.602679_g13075_i0 | PRJNA473799 | 13349 | 297 | 3.602679 | 10.69995663 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 176 | 1.57e-39 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g13075 | i0 | 78.37 | 2.03030303030303 | 319 | 35 | 98 | 17 | 2 | 291 | 2494587 | 2494274 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 603 | 176 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 10649338 | 10649338 | PRJNA473799_P_NODE_28169_length_262_cov_1.629630_g27895_i0 | PRJNA473799 | 28169 | 262 | 1.62963 | 4.2696306 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 357 | 4.52e-94 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g27895 | i0 | 91.221 | 1 | 262 | 23 | 100 | 0 | 1 | 262 | 4870882 | 4871143 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 262 | 357 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 10649448 | 10649448 | PRJNA473799_P_NODE_36889_length_250_cov_0.870056_g36615_i0 | PRJNA473799 | 36889 | 250 | 0.870056 | 2.17514 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 241 | 4.5e-59 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g36615 | i0 | 84.4 | 55.04 | 250 | 33 | 99 | 6 | 1 | 247 | 4004764 | 4005010 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 13760 | 241 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 14474162 | 14474162 | PRJNA473799_P_NODE_26032_length_266_cov_1.663212_g25758_i0 | PRJNA473799 | 26032 | 266 | 1.663212 | 4.42414392 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 366 | 7.65e-97 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g25758 | i0 | 92.337 | 442.462406015038 | 261 | 14 | 97 | 6 | 9 | 266 | 1904745 | 1904488 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 117695 | 366 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 15748474 | 15748474 | PRJNA473799_P_NODE_4133_length_652_cov_4.169257_g3873_i0 | PRJNA473799 | 4133 | 652 | 4.169257 | 27.18355564 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 826 | 0 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g3873 | i0 | 89.818 | 57.6687116564417 | 658 | 48 | 100 | 17 | 1 | 652 | 3044058 | 3043414 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 37600 | 826 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 18946987 | 18946987 | PRJNA473799_P_NODE_11275_length_313_cov_5.333333_g11001_i0 | PRJNA473799 | 11275 | 313 | 5.333333 | 16.69333229 | Gemmatimonadaceae | 219687 | Bacteria | Bacteria | 453 | 6.87e-123 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g11001 | i0 | 93.98 | 227.779552715655 | 299 | 18 | 96 | 0 | 15 | 313 | 3042896 | 3043194 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 71295 | 453 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 20847501 | 20847501 | PRJNA473799_P_NODE_4897_length_570_cov_2.702213_g4631_i0 | PRJNA473799 | 4897 | 570 | 2.702213 | 15.4026141 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 640 | 9.429999999999998e-179 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g4631 | i0 | 87.26 | 131.2 | 573 | 58 | 99 | 14 | 4 | 570 | 3042874 | 3042311 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 74784 | 640 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 22121965 | 22121965 | PRJNA473799_P_NODE_19838_length_279_cov_1.019417_g19564_i0 | PRJNA473799 | 19838 | 279 | 1.019417 | 2.84417343 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 364 | 2.909999999999999e-96 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g19564 | i0 | 90.357 | 186.741935483871 | 280 | 23 | 100 | 4 | 1 | 279 | 8175871 | 8176147 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 52101 | 364 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 22122016 | 22122016 | PRJNA473799_P_NODE_23358_length_271_cov_2.257576_g23084_i0 | PRJNA473799 | 23358 | 271 | 2.257576 | 6.11803096 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g23084 | i0 | 100 | 0.11070110701107 | 30 | 0 | 11 | 0 | 3 | 32 | 3721894 | 3721865 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 30 | 56.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 22122233 | 22122233 | PRJNA473799_P_NODE_3838_length_686_cov_1.378467_g3579_i0 | PRJNA473799 | 3838 | 686 | 1.378467 | 9.45628362 | Gemmatimonas phototrophica | 1379270 | Bacteria | Bacteria | 726 | 0 | NTclustered | gi|1015602748|gb|CP011454.1| | 1379270 | g3579 | i0 | 86.111 | 68.2638483965015 | 684 | 83 | 99 | 9 | 1 | 682 | 2075714 | 2076387 | Gemmatimonas phototrophica strain AP64, complete genome | blastn | 46829 | 726 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas phototrophica | |
| 22122290 | 22122290 | PRJNA473799_P_NODE_42638_length_247_cov_0.885057_g42364_i0 | PRJNA473799 | 42638 | 247 | 0.885057 | 2.18609079 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 200 | 7.529999999999999e-47 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g42364 | i0 | 81.301 | 34.2793522267206 | 246 | 46 | 99 | 0 | 1 | 246 | 8348179 | 8348424 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 8467 | 200 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 22122486 | 22122486 | PRJNA473799_P_NODE_55598_length_236_cov_2.705521_g55324_i0 | PRJNA473799 | 55598 | 236 | 2.705521 | 6.38502956 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 294 | 3.19e-75 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g55324 | i0 | 90.868 | 1.04661016949153 | 219 | 20 | 93 | 0 | 18 | 236 | 6117641 | 6117423 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 247 | 294 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 23397788 | 23397788 | PRJNA473799_P_NODE_26579_length_265_cov_1.619792_g26305_i0 | PRJNA473799 | 26579 | 265 | 1.619792 | 4.2924488 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 209 | 1.36e-49 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g26305 | i0 | 81.203 | 12.5094339622642 | 266 | 44 | 99 | 6 | 1 | 263 | 2144036 | 2143774 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 3315 | 209 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;