RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA473799" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA473799 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2371049 2371049 PRJNA473799_P_NODE_2042_length_1003_cov_3.578495_g1837_i0 PRJNA473799 2042 1003 3.578495 35.89230485 Candidatus Nanosynbacteraceae 2093822 Bacteria Bacteria 1541 0   NTclustered gi|1842055981|gb|CP040001.1| 713059 g1837 i0 94.934 340.260219341974 987 45 98 5 19 1003 151568 152551 Candidatus Saccharibacteria bacterium oral taxon 488 strain CM006 chromosome, complete genome blastn 341281 1552 0.992912371134021 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
3646877 3646877 PRJNA473799_P_NODE_30683_length_257_cov_9.320652_g30409_i0 PRJNA473799 30683 257 9.320652 23.95407564 Candidatus Nanosynbacter 2093823 Bacteria Bacteria 475 1.1699999999999999e-129   NTclustered gi|1842054184|gb|CP039999.1| 713059 g30409 i0 100 209.287937743191 257 0 100 0 1 257 142469 142213 Candidatus Saccharibacteria bacterium oral taxon 488 strain CM001 chromosome, complete genome blastn 53787 475 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
6823387 6823387 PRJNA473799_P_NODE_37266_length_250_cov_0.870056_g36992_i0 PRJNA473799 37266 250 0.870056 2.17514 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 342 1.1999999999999999e-89   NTclustered gi|2070586293|gb|CP076101.2| 1917697 g36992 i0 91.532 2.992 248 21 99 0 3 250 141857 141610 MAG: Candidatus Saccharimonas sp. isolate JCVI_32_bin.49 chromosome, complete genome blastn 748 342 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
6823572 6823572 PRJNA473799_P_NODE_48226_length_244_cov_0.900585_g47952_i0 PRJNA473799 48226 244 0.900585 2.1974274 Candidatus Nanosynbacter sp. BB002 3393757 Bacteria Bacteria 435 1.87e-117   NTclustered gi|2692798772|gb|CP146064.1| 3393757 g47952 i0 98.77 14.9713114754098 244 3 100 0 1 244 543766 543523 Candidatus Nanosynbacter sp. BB002 chromosome, complete genome blastn 3653 435 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp. BB002
11924076 11924076 PRJNA473799_P_NODE_14590_length_290_cov_1.414747_g14316_i0 PRJNA473799 14590 290 1.414747 4.1027663 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 420 6.39e-113   NTclustered gi|2070586293|gb|CP076101.2| 1917697 g14316 i0 93.031 0.989655172413793 287 20 99 0 1 287 364949 365235 MAG: Candidatus Saccharimonas sp. isolate JCVI_32_bin.49 chromosome, complete genome blastn 287 420 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
11924446 11924446 PRJNA473799_P_NODE_42070_length_247_cov_0.885057_g41796_i0 PRJNA473799 42070 247 0.885057 2.18609079 Candidatus Saccharibacteria bacterium oral taxon 955 2572087 Bacteria Bacteria 457 4.05e-124   NTclustered gi|1805654977|gb|CP047916.1| 2572087 g41796 i0 100 6 247 0 100 0 1 247 124876 124630 Candidatus Saccharibacteria bacterium oral taxon 955 strain FS17P chromosome, complete genome blastn 1482 457 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 955
11924628 11924628 PRJNA473799_P_NODE_54430_length_241_cov_0.916667_g54156_i0 PRJNA473799 54430 241 0.916667 2.20916747 Candidatus Saccharibacteria bacterium RAAC3_TM7_1 1394711 Bacteria Bacteria 148 2.69e-31   NTclustered gi|563353835|gb|CP006915.1| 1394711 g54156 i0 94.737 39.356846473029 95 5 39 0 63 157 305117 305023 Candidatus Saccharibacteria bacterium RAAC3_TM7_1, complete genome blastn 9485 148 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium RAAC3_TM7_1
15748028 15748028 PRJNA473799_P_NODE_11893_length_310_cov_2.274262_g11619_i0 PRJNA473799 11893 310 2.274262 7.0502122 uncultured Candidatus Saccharibacteria bacterium 179883 Bacteria Bacteria 556 5.03e-154   NTclustered gi|2874253873|emb|OY969928.1| 179883 g11619 i0 99.032 237.632258064516 310 3 100 0 1 310 597435 597744 MAG: uncultured Candidatus Saccharibacteria bacterium isolate MFD04212.bin.c.13 genome assembly, chromosome: 1 blastn 73666 556 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium
17673649 17673649 PRJNA473799_P_NODE_8474_length_368_cov_3.627119_g8200_i0 PRJNA473799 8474 368 3.627119 13.34779792 Candidatus Nanosynbacteraceae 2093822 Bacteria Bacteria 680 0   NTclustered gi|2306607015|emb|OX335598.1| 2026720 g8200 i0 100 180.364130434783 368 0 100 0 1 368 80490 80123 Candidatus Saccharibacteria bacterium isolate PRJEB56001 genome assembly, chromosome: contig00001 blastn 66374 680 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
20847042 20847042 PRJNA473799_P_NODE_16637_length_286_cov_0.985915_g16363_i0 PRJNA473799 16637 286 0.985915 2.8197169 Candidatus Saccharibacteria bacterium oral taxon 955 2572087 Bacteria Bacteria 405 1.76e-108   NTclustered gi|1663049602|gb|CP040008.1| 2572087 g16363 i0 92.553 159.465034965035 282 21 99 0 1 282 138866 138585 Candidatus Saccharibacteria bacterium oral taxon 955 strain PM004 chromosome, complete genome blastn 45607 405 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 955
23397677 23397677 PRJNA473799_P_NODE_19099_length_280_cov_1.492754_g18825_i0 PRJNA473799 19099 280 1.492754 4.1797112 Candidatus Nanogingivalaceae bacterium 2725942 Bacteria Bacteria 446 1.01e-120   NTclustered gi|2070571752|gb|CP072208.2| 2725942 g18825 i0 95.357 63.75 280 13 100 0 1 280 111525 111246 MAG: Candidatus Nanogingivalaceae bacterium isolate JCVI_27_bin.3 chromosome, complete genome blastn 17850 446 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Nanosyncoccalia Candidatus Nanogingivales Candidatus Nanogingivalaceae   Candidatus Nanogingivalaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;