RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA473799" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA473799 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8098880 8098880 PRJNA473799_P_NODE_43307_length_246_cov_2.225434_g43033_i0 PRJNA473799 43307 246 2.225434 5.47456764 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 267 7.289999999999999e-67   NTclustered gi|2621786419|emb|OY782877.1| 2030809 g43033 i0 86.345 258.967479674797 249 29 100 5 1 246 2444289 2444043 MAG: Candidatus Hydrogenedentes bacterium isolate 28e603e2-5466-4732-bb1a-a7370d5bccbd genome assembly, chromosome: 1 blastn 63706 267 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
19571132 19571132 PRJNA473799_P_NODE_13816_length_294_cov_1.212670_g13542_i0 PRJNA473799 13816 294 1.21267 3.5652498 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 414 3.02e-111   NTclustered gi|2621786419|emb|OY782877.1| 2030809 g13542 i0 92.734 341.850340136054 289 18 98 2 8 294 2442912 2442625 MAG: Candidatus Hydrogenedentes bacterium isolate 28e603e2-5466-4732-bb1a-a7370d5bccbd genome assembly, chromosome: 1 blastn 100504 414 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
19571794 19571794 PRJNA473799_P_NODE_8316_length_372_cov_3.892977_g8042_i0 PRJNA473799 8316 372 3.892977 14.48187444 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 324 6.79e-84   NTclustered gi|2621786419|emb|OY782877.1| 2030809 g8042 i0 82.656 113.180107526882 369 60 99 4 5 372 2441527 2441892 MAG: Candidatus Hydrogenedentes bacterium isolate 28e603e2-5466-4732-bb1a-a7370d5bccbd genome assembly, chromosome: 1 blastn 42103 324 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;