RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA473799" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA473799 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4272460 4272460 PRJNA473799_P_NODE_18864_length_281_cov_1.009615_g18590_i0 PRJNA473799 18864 281 1.009615 2.83701815 Alphachrysovirus brassicae 2560353 Viruses Viruses 448 2.8299999999999996e-121   NTclustered gi|2780121170|gb|PP971587.1| 1692191 g18590 i0 95.374 2 281 13 100 0 1 281 2602 2882 MAG: Brassica campestris chrysovirus 1 isolate Tangail_1 segment RNA2, partial sequence blastn 562 448 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Chrysoviridae Alphachrysovirus Alphachrysovirus brassicae
17022760 17022760 PRJNA473799_P_NODE_15074_length_289_cov_1.425926_g14800_i0 PRJNA473799 15074 289 1.425926 4.12092614 Ripaglys virus 3130696 Viruses Viruses 209 1.4999999999999998e-49   NTclustered gi|2717320496|gb|PP172998.1| 3130696 g14800 i0 80.272 219.121107266436 294 45 100 11 1 289 1092 1377 MAG: Ripaglys virus isolate KCAP2_k141_358354 genomic sequence blastn 63326 209 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripaglys virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;