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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA473641" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 14 ✖

bioproject 1

  • PRJNA473641 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
445028 445028 PRJNA473641_P_NODE_1941_length_597_cov_3.654580_g1859_i0 PRJNA473641 1941 597 3.65458 21.8178426 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 1048 0   NTclustered gi|2754692633|gb|PP872994.1| 3003959 g1859 i0 98.325 1 597 10 100 0 1 597 4756 4160 MAG: Picornavirales sp. isolate TC-PLV-438 MR233-17E/4129 genomic sequence blastn 597 1048 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
1719638 1719638 PRJNA473641_P_NODE_11782_length_297_cov_2.642857_g11699_i0 PRJNA473641 11782 297 2.642857 7.84928529 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 516 8.14e-142   NTclustered gi|2754692633|gb|PP872994.1| 3003959 g11699 i0 97.98 1 297 6 100 0 1 297 3775 4071 MAG: Picornavirales sp. isolate TC-PLV-438 MR233-17E/4129 genomic sequence blastn 297 516 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
5548912 5548912 PRJNA473641_P_NODE_685_length_911_cov_1.852029_g622_i0 PRJNA473641 685 911 1.852029 16.87198419 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 1037 0   NTclustered gi|2754692633|gb|PP872994.1| 3003959 g622 i0 88.101 2.52140504939627 874 102 96 2 1 873 3624 2752 MAG: Picornavirales sp. isolate TC-PLV-438 MR233-17E/4129 genomic sequence blastn 2297 1037 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
5548952 5548952 PRJNA473641_P_NODE_8525_length_334_cov_1.084291_g8442_i0 PRJNA473641 8525 334 1.084291 3.62153194 Betacoronavirus pandemicum 3418604 Viruses Viruses 113 1.42e-20   NTclustered gi|2165832678|emb|OV195277.1| 2697049 g8442 i0 93.59 47.997005988024 78 1 22 3 1 74 29930 30007 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 16031 113 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
6198613 6198613 PRJNA473641_P_NODE_26225_length_237_cov_2.439024_g26142_i0 PRJNA473641 26225 237 2.439024 5.78048688 root 1 Root_unresolved Root_unresolved 438 1.4e-118   NTclustered gi|15485521|emb|AJ293908.1| 10515 g26142 i0 100 99.9662447257384 237 0 100 0 1 237 1327 1091 Human adenovirus type 2 penton gene, isolate 352 blastn 23692 438 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
6822900 6822900 PRJNA473641_P_NODE_6666_length_365_cov_1.051370_g6583_i0 PRJNA473641 6666 365 1.05137 3.8375005 Alpharetrovirus avileu 3426267 Viruses Viruses 675 0   NTclustered gi|2575656431|gb|OQ990407.1| 11864 g6583 i0 100 100.005479452055 365 0 100 0 1 365 1242 1606 Avian leukosis virus isolate GX23BH03K envelope protein gene, partial cds blastn 36502 675 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Alpharetrovirus Alpharetrovirus avileu
6822908 6822908 PRJNA473641_P_NODE_6_length_3647_cov_8.905428_g4_i0 PRJNA473641 6 3647 8.905428 324.78095916 Arma chinensis virus 1 2974718 Viruses Viruses 2344 0   NTclustered gi|2289441063|gb|MW846634.1| 2974718 g4 i0 78.488 26.8390457910611 3677 722 100 61 1 3647 5545 9182 Arma chinensis virus 1 isolate GZ1, complete genome blastn 97882 2344 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Arma chinensis virus 1
10023748 10023748 PRJNA473641_P_NODE_15968_length_259_cov_2.064516_g15885_i0 PRJNA473641 15968 259 2.064516 5.34709644 root 1 Root_unresolved Root_unresolved 296 9.87e-76   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g15885 i0 96.648 103.328185328185 179 4 97 2 10 186 16393 16215 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 26762 298 0.993288590604027 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
14473753 14473753 PRJNA473641_P_NODE_24932_length_242_cov_0.911243_g24849_i0 PRJNA473641 24932 242 0.911243 2.20520806 Gylbovirus aagae 2955967 Viruses Viruses 403 5.22e-108   NTclustered gi|1407526736|gb|MH430649.1| 2230910 g24849 i0 97.083 28.5537190082645 240 5 99 1 3 242 6031 5794 Aedes anphevirus isolate Bora Bora nucleoprotein and small TMD protein genes, complete cds; nonfunctional putative glycoprotein genes, complete sequence; putative ZnF protein and putative TMD protein genes, complete cds; and nonfunctional RdRP protein gene, complete sequence blastn 6910 403 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Xinmoviridae Gylbovirus Gylbovirus aagae
14473858 14473858 PRJNA473641_P_NODE_572_length_965_cov_3.014574_g512_i0 PRJNA473641 572 965 3.014574 29.0906391 Dicistroviridae sp. 1955144 Viruses Viruses 538 6.149999999999998e-148   NTclustered gi|2756423296|gb|PP745438.1| 1955144 g512 i0 76.899 1.00932642487047 974 209 100 14 1 965 4860 3894 MAG: Dicistroviridae sp. isolate 087_50073 genomic sequence blastn 974 538 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
14473911 14473911 PRJNA473641_P_NODE_7872_length_343_cov_3.425926_g7789_i0 PRJNA473641 7872 343 3.425926 11.75092618 brine shrimp dicistrovirus 1 2900466 Viruses Viruses 82.4 4.14e-11   NTclustered gi|2209094695|gb|OL472420.1| 2900466 g7789 i0 86.842 1.06705539358601 76 6 22 3 232 307 9460 9531 MAG: Brine shrimp dicistrovirus 1 isolate KAZ/15-16 RNA-dependent RNA polymerase and capsid protein genes, complete cds blastn 366 82.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   brine shrimp dicistrovirus 1
20846766 20846766 PRJNA473641_P_NODE_25377_length_241_cov_1.589286_g25294_i0 PRJNA473641 25377 241 1.589286 3.83017926 Zebrafish picornavirus 1 2304617 Viruses Viruses 418 1.8599999999999995e-112   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g25294 i0 97.925 3 241 5 100 0 1 241 5886 6126 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 723 418 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
21497316 21497316 PRJNA473641_P_NODE_3297_length_479_cov_1.270936_g3214_i0 PRJNA473641 3297 479 1.270936 6.08778344 root 1 Root_unresolved Root_unresolved 865 0   NTclustered gi|2620236085|gb|OR777220.1| 10515 g3214 i0 99.372 99.7933194154488 478 2 99 1 3 479 16079 15602 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 47801 865 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
24047435 24047435 PRJNA473641_P_NODE_819_length_852_cov_2.568678_g752_i0 PRJNA473641 819 852 2.568678 21.88513656 root 1 Root_unresolved Root_unresolved 1555 0   NTclustered gi|2620236085|gb|OR777220.1| 10515 g752 i0 99.648 100 852 2 100 1 1 852 16820 17670 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 85200 1555 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;