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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA473201" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 15 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA473201 · 15 ✖

analysis 1

  • blastn · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
444738 444738 PRJNA473201_P_NODE_87281_length_225_cov_17.427632_g86539_i0 PRJNA473201 87281 225 17.427632 39.212172 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.02   NTclustered gi|2912998575|dbj|AP039604.1| 145626 g86539 i0 100 0.124444444444444 28 0 12 0 105 132 21708674 21708647 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 23, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
3646039 3646039 PRJNA473201_P_NODE_48023_length_296_cov_4.291480_g47281_i0 PRJNA473201 48023 296 4.29148 12.7027808 Opisthokonta 33154 Mollusca Mollusca 102 2.69e-17   NTclustered gi|7677509|gb|AF252331.1| 80833 g47281 i0 94.03 21.2060810810811 67 4 23 0 225 291 206 140 Tridacna crocea isolate treef5 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6277 102 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Cardiida Cardiidae Tridacna Tridacna crocea
4271700 4271700 PRJNA473201_P_NODE_8604_length_691_cov_4.665049_g7895_i0 PRJNA473201 8604 691 4.665049 32.23548859 Gigantopelta aegis 1735272 Mollusca Mollusca 58.4 0.001   NTclustered gi|2034304614|ref|XM_041493588.1| 1735272 g7895 i0 94.595 0.114327062228654 37 2 5 0 178 214 2 38 PREDICTED: Gigantopelta aegis protein kintoun-like (LOC121368840), mRNA blastn 79 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
5547570 5547570 PRJNA473201_P_NODE_47065_length_298_cov_11.964444_g46323_i0 PRJNA473201 47065 298 11.964444 35.65404312 Octopus bimaculoides 37653 Mollusca Mollusca 56.5 0.002   NTclustered gi|2427239284|ref|XM_052967297.1| 37653 g46323 i0 96.97 0.929530201342282 33 1 11 0 250 282 1320 1288 PREDICTED: Octopus bimaculoides uncharacterized LOC106882728 (LOC106882728), transcript variant X1, mRNA blastn 277 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides
6822028 6822028 PRJNA473201_P_NODE_70266_length_249_cov_0.875000_g69524_i0 PRJNA473201 70266 249 0.875 2.17875 Mytilus edulis 6550 Mollusca Mollusca 422 1.49e-113   NTclustered gi|2912367598|ref|XM_071296461.1| 6550 g69524 i0 97.211 69.5301204819277 251 4 100 2 1 249 1312 1561 PREDICTED: Mytilus edulis tubulin alpha chain, testis-specific (LOC139510141), mRNA blastn 17313 422 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
8097789 8097789 PRJNA473201_P_NODE_84927_length_241_cov_0.916667_g84185_i0 PRJNA473201 84927 241 0.916667 2.20916747 Bradybaena similaris 145626 Mollusca Mollusca 65.8 2.79e-6   NTclustered gi|2912991694|dbj|AP039596.1| 145626 g84185 i0 97.368 11.2199170124481 38 1 16 0 65 102 52995677 52995640 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 15, sequence blastn 2704 65.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
12574393 12574393 PRJNA473201_P_NODE_87430_length_221_cov_47.189189_g86688_i0 PRJNA473201 87430 221 47.189189 104.28810769 Metazoa 33208 Mollusca Mollusca 56.5 0.002   NTclustered gi|2912988862|dbj|AP039593.1| 145626 g86688 i0 100 0.719457013574661 30 0 14 0 188 217 47721518 47721547 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 12, sequence blastn 159 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
13197793 13197793 PRJNA473201_P_NODE_61051_length_263_cov_1.621053_g60309_i0 PRJNA473201 61051 263 1.621053 4.26336939 Mytilus trossulus 6551 Mollusca Mollusca 58.4 5.16e-4   NTclustered gi|2693895979|ref|XM_063549768.1| 6551 g60309 i0 97.143 0.133079847908745 35 0 13 1 19 52 236 202 PREDICTED: Mytilus trossulus putative uncharacterized protein DDB_G0288537 (LOC134689799), mRNA blastn 35 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus trossulus
15122523 15122523 PRJNA473201_P_NODE_34012_length_340_cov_1.573034_g33270_i0 PRJNA473201 34012 340 1.573034 5.3483156 Magallana 147004 Mollusca Mollusca 65.8 4.13e-6   NTclustered gi|2751293263|ref|XM_011438944.4| 29159 g33270 i0 97.368 1.22941176470588 38 1 11 0 284 321 728 691 PREDICTED: Magallana gigas probable ATP-dependent RNA helicase DDX4 (LOC105335166), transcript variant X1, mRNA blastn 418 65.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana gigas
17021500 17021500 PRJNA473201_P_NODE_59114_length_268_cov_17.394872_g58372_i0 PRJNA473201 59114 268 17.394872 46.61825696 Bradybaena similaris 145626 Mollusca Mollusca 58.4 5.27e-4   NTclustered gi|2912991694|dbj|AP039596.1| 145626 g58372 i0 97.059 0.126865671641791 34 1 13 0 194 227 57756139 57756106 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 15, sequence blastn 34 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
18295507 18295507 PRJNA473201_P_NODE_44875_length_304_cov_8.831169_g44133_i0 PRJNA473201 44875 304 8.831169 26.84675376 Littorina saxatilis 31220 Mollusca Mollusca 54.7 0.008   NTclustered gi|2868683459|ref|XR_011454898.1| 31220 g44133 i0 100 0.0953947368421053 29 0 10 0 189 217 849 877 PREDICTED: Littorina saxatilis uncharacterized lncRNA (LOC138963771), ncRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
20845296 20845296 PRJNA473201_P_NODE_30377_length_358_cov_23.673684_g29635_i0 PRJNA473201 30377 358 23.673684 84.75178872 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.009   NTclustered gi|2912986657|dbj|AP039591.1| 145626 g29635 i0 96.875 0.0893854748603352 32 1 9 0 250 281 28891651 28891620 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 10, sequence blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
20845714 20845714 PRJNA473201_P_NODE_55717_length_277_cov_21.794118_g54975_i0 PRJNA473201 55717 277 21.794118 60.36970686 Mytilus trossulus 6551 Mollusca Mollusca 56.5 0.002   NTclustered gi|2693972998|ref|XM_063588363.1| 6551 g54975 i0 96.97 0.11913357400722 33 1 12 0 55 87 1567 1535 PREDICTED: Mytilus trossulus uncharacterized LOC134724949 (LOC134724949), mRNA blastn 33 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus trossulus
20846323 20846323 PRJNA473201_P_NODE_86717_length_233_cov_5.212500_g85975_i0 PRJNA473201 86717 233 5.2125 12.145125 Mercenaria mercenaria 6596 Mollusca Mollusca 52.8 0.021   NTclustered gi|2442048292|ref|XM_053539395.1| 6596 g85975 i0 100 0.120171673819742 28 0 12 0 40 67 3125 3098 PREDICTED: Mercenaria mercenaria mucin-like protein (LOC123523944), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
22119930 22119930 PRJNA473201_P_NODE_18978_length_454_cov_2.094488_g18236_i0 PRJNA473201 18978 454 2.094488 9.50897552 Mytilus edulis 6550 Mollusca Mollusca 63.9 2.03e-5   NTclustered gi|2912343764|ref|XM_071284956.1| 6550 g18236 i0 91.304 0.220264317180617 46 4 10 0 369 414 519 474 PREDICTED: Mytilus edulis fibroin heavy chain-like (LOC139496382), mRNA blastn 100 63.9 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;