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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA473201" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA473201 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9371717 9371717 PRJNA473201_P_NODE_47168_length_298_cov_1.928889_g46426_i0 PRJNA473201 47168 298 1.928889 5.74808922 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 263 1.18e-65   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g46426 i0 82.828 20.6543624161074 297 47 99 4 4 298 1808 2102 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 6155 263 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9372127 9372127 PRJNA473201_P_NODE_68908_length_250_cov_0.870056_g68166_i0 PRJNA473201 68908 250 0.870056 2.17514 Stenamoeba amazonica 746910 Discosea other_Eukaryota 422 1.4999999999999998e-113   NTclustered gi|292399456|gb|GU810184.1| 746910 g68166 i0 97.211 45.756 251 3 100 4 1 250 1151 904 Stenamoeba amazonica strain P119 small subunit ribosomal RNA gene, partial sequence blastn 11439 422 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Stenamoeba Stenamoeba amazonica
10647158 10647158 PRJNA473201_P_NODE_13349_length_548_cov_12.058947_g12610_i0 PRJNA473201 13349 548 12.058947 66.08302956 Ripella decalvata 2047822 Discosea other_Eukaryota 835 0   NTclustered gi|1269228437|gb|MF683562.1| 2047822 g12610 i0 94.364 100.64598540146 550 21 100 6 1 548 1045 504 Ripella decalvata clone 15101 18S ribosomal RNA gene, partial sequence blastn 55154 835 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella decalvata
17020738 17020738 PRJNA473201_P_NODE_17014_length_482_cov_5.041565_g16272_i0 PRJNA473201 17014 482 5.041565 24.3003433 Ripella decalvata 2047822 Discosea other_Eukaryota 743 0   NTclustered gi|1269228431|gb|MF683556.1| 2047822 g16272 i0 94.433 101.016597510373 485 23 100 3 1 482 1159 1642 Ripella decalvata clone 26.2.11 18S ribosomal RNA gene, partial sequence blastn 48690 743 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella decalvata
17021628 17021628 PRJNA473201_P_NODE_65954_length_251_cov_0.865169_g65212_i0 PRJNA473201 65954 251 0.865169 2.17157419 Vannella ebro 207334 Discosea other_Eukaryota 320 5.65e-83   NTclustered gi|33946344|gb|AY294151.1| 207334 g65212 i0 89.641 91.3266932270916 251 26 100 0 1 251 870 1120 Vannella ebro actin mRNA, complete cds blastn 22923 320 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella ebro
18295137 18295137 PRJNA473201_P_NODE_23955_length_402_cov_3.501520_g23213_i0 PRJNA473201 23955 402 3.50152 14.0761104 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 196 1.68e-45   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g23213 i0 80 41.6268656716418 270 50 67 3 135 402 544 277 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 16734 196 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18296237 18296237 PRJNA473201_P_NODE_81815_length_243_cov_0.905882_g81073_i0 PRJNA473201 81815 243 0.905882 2.20129326 Platyamoeba placida 3454475 Discosea other_Eukaryota 311 3.27e-80   NTclustered gi|33946348|gb|AY294153.1| 197527 g81073 i0 90 97.3497942386831 240 24 99 0 1 240 92 331 Platyamoeba placida actin mRNA, partial cds blastn 23656 311 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
20845697 20845697 PRJNA473201_P_NODE_54817_length_280_cov_1.149758_g54075_i0 PRJNA473201 54817 280 1.149758 3.2193224 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 189 1.88e-43   NTclustered gi|470484553|ref|XM_004344028.1| 1257118 g54075 i0 80.4 4.30714285714286 250 47 89 2 31 279 540 292 Acanthamoeba castellanii str. Neff Sadenosyl-L-homocysteine hydrolase, putative (ACA1_054200), partial mRNA blastn 1206 189 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22121190 22121190 PRJNA473201_P_NODE_84818_length_241_cov_0.916667_g84076_i0 PRJNA473201 84818 241 0.916667 2.20916747 Dermamoeba algensis 242549 Discosea other_Eukaryota 169 2.0599999999999997e-37   NTclustered gi|33946341|gb|AY294148.1| 242549 g84076 i0 91.736 49.3983402489627 121 10 50 0 1 121 1166 1046 Dermamoeba algensis small subunit ribosomal RNA gene, partial sequence blastn 11905 169 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Dermamoeba Dermamoeba algensis
23395510 23395510 PRJNA473201_P_NODE_14099_length_532_cov_17.298475_g13358_i0 PRJNA473201 14099 532 17.298475 92.027887 Ripella sp. 805 1217113 Discosea other_Eukaryota 843 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g13358 i0 95.345 101.402255639098 537 14 100 8 1 532 14 544 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 53946 843 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;