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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA473201" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA473201 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
443725 443725 PRJNA473201_P_NODE_35781_length_333_cov_1.111538_g35039_i0 PRJNA473201 35781 333 1.111538 3.70142154 Batrachochytrium dendrobatidis 109871 Fungi Fungi 250 1.04e-61   NTclustered gi|2897839259|gb|CP161931.1| 109871 g35039 i0 82.131 72.8888888888889 291 52 87 0 35 325 786904 787194 Batrachochytrium dendrobatidis strain JEL423 chromosome 9 blastn 24272 250 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis
1718259 1718259 PRJNA473201_P_NODE_16662_length_488_cov_1.110843_g15920_i0 PRJNA473201 16662 488 1.110843 5.42091384 Polychytrium aggregatum 110093 Fungi Fungi 172 3.499999999999999e-38   NTclustered gi|2432162630|ref|XM_053112000.1| 110093 g15920 i0 78.676 28.2602459016393 272 48 55 6 213 482 523 260 Polychytrium aggregatum ribosomal protein L22/L17 (BJ171DRAFT_515986), mRNA blastn 13791 172 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
6821889 6821889 PRJNA473201_P_NODE_63566_length_257_cov_0.956522_g62824_i0 PRJNA473201 63566 257 0.956522 2.45826154 Polychytrium aggregatum 110093 Fungi Fungi 156 1.73e-33   NTclustered gi|2432130088|ref|XM_053109047.1| 110093 g62824 i0 79.646 1.24513618677043 226 38 86 7 30 251 92 313 Polychytrium aggregatum ribosomal protein L11 (BJ171DRAFT_484855), mRNA blastn 320 156 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
10647168 10647168 PRJNA473201_P_NODE_14089_length_533_cov_1.256522_g13348_i0 PRJNA473201 14089 533 1.256522 6.69726226 Neocallimastix cameroonii 1764037 Fungi Fungi 691 0   NTclustered gi|1388116238|gb|MH043806.1| 1764037 g13348 i0 95.195 2.43151969981238 437 21 82 0 97 533 1014 578 Neocallimastix cameroonii strain G3 Glycosyl hydrolase family 19 mRNA, partial cds blastn 1296 691 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Neocallimastix Neocallimastix cameroonii
13197412 13197412 PRJNA473201_P_NODE_39731_length_317_cov_1.889344_g38989_i0 PRJNA473201 39731 317 1.889344 5.98922048 Neocallimastix cameroonii 1764037 Fungi Fungi 453 6.970000000000001e-123   NTclustered gi|1388116238|gb|MH043806.1| 1764037 g38989 i0 92.097 2.70031545741325 329 14 100 2 1 317 442 114 Neocallimastix cameroonii strain G3 Glycosyl hydrolase family 19 mRNA, partial cds blastn 856 453 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Neocallimastix Neocallimastix cameroonii
17021888 17021888 PRJNA473201_P_NODE_77494_length_245_cov_0.895349_g76752_i0 PRJNA473201 77494 245 0.895349 2.19360505 Polychytrium aggregatum 110093 Fungi Fungi 215 2.67e-51   NTclustered gi|2432172524|ref|XM_053106693.1| 110093 g76752 i0 82.645 16.8204081632653 242 42 99 0 4 245 2780 2539 Polychytrium aggregatum uncharacterized protein (BJ171DRAFT_251536), mRNA blastn 4121 215 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
20846319 20846319 PRJNA473201_P_NODE_86297_length_239_cov_3.475904_g85555_i0 PRJNA473201 86297 239 3.475904 8.30741056 Polychytrium aggregatum 110093 Fungi Fungi 121 5.81e-23   NTclustered gi|2432138713|ref|XM_053107478.1| 110093 g85555 i0 84.252 8.24686192468619 127 16 52 3 115 239 148 24 Polychytrium aggregatum large subunit ribosomal protein 29 (BJ171DRAFT_421272), partial mRNA blastn 1971 121 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
23396364 23396364 PRJNA473201_P_NODE_59879_length_266_cov_2.994819_g59137_i0 PRJNA473201 59879 266 2.994819 7.96621854 Spizellomyces punctatus 109760 Fungi Fungi 119 2.36e-22   NTclustered gi|1026981961|ref|XM_016752543.1| 645134 g59137 i0 81.579 0.571428571428571 152 20 57 5 90 240 225 81 Spizellomyces punctatus DAOM BR117 40S ribosomal protein S30 (SPPG_04300), mRNA blastn 152 119 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;