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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA473201" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA473201 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4271071 4271071 PRJNA473201_P_NODE_56504_length_275_cov_2.757426_g55762_i0 PRJNA473201 56504 275 2.757426 7.5829215 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|916498813|ref|XM_013494772.1| 44415 g55762 i0 100 0.105454545454545 29 0 11 0 96 124 2511 2483 Eimeria mitis elongation factor Tu GTP-binding domain-containing protein, putative (EMH_0090800), partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
6198558 6198558 PRJNA473201_P_NODE_87505_length_220_cov_23.795918_g86763_i0 PRJNA473201 87505 220 23.795918 52.3510196 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 84.2 6.91e-12   NTclustered gi|573016600|gb|KF018657.1| 36330 g86763 i0 77.778 20.9636363636364 135 30 61 0 3 137 1116 982 Plasmodium ovale isolate ZBP-HN clone RH4 18S ribosomal RNA gene, complete sequence blastn 4612 84.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium ovale
7472991 7472991 PRJNA473201_P_NODE_54446_length_281_cov_1.110577_g53704_i0 PRJNA473201 54446 281 1.110577 3.12072137 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.026   NTclustered gi|915122992|ref|XM_013477306.1| 5804 g53704 i0 100 0.199288256227758 28 0 10 0 94 121 1481 1454 Eimeria maxima ribosomal RNA methyltransferase, putative partial mRNA blastn 56 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
8097420 8097420 PRJNA473201_P_NODE_67347_length_250_cov_1.790960_g66605_i0 PRJNA473201 67347 250 1.79096 4.4774 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 268 2.07e-67   NTclustered gi|820695469|tpe|LN714488.1| 572307 g66605 i0 86.345 2.616 249 30 99 4 1 247 157195 156949 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 654 268 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
8747954 8747954 PRJNA473201_P_NODE_49327_length_293_cov_10.518182_g48585_i0 PRJNA473201 49327 293 10.518182 30.81827326 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.027   NTclustered gi|1620127633|ref|XM_028673323.1| 5849 g48585 i0 100 0.286689419795222 28 0 10 0 112 139 10629 10602 Plasmodium gallinaceum hypothetical protein (PGAL8A_00456300), partial mRNA blastn 84 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
9371821 9371821 PRJNA473201_P_NODE_53768_length_282_cov_26.224880_g53026_i0 PRJNA473201 53768 282 26.22488 73.9541616 Plasmodium gaboni 647221 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.026   NTclustered gi|1084895398|ref|XM_018787168.1| 647221 g53026 i0 100 0.099290780141844 28 0 10 0 195 222 253 226 Plasmodium gaboni hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gaboni
9372035 9372035 PRJNA473201_P_NODE_64388_length_254_cov_31.635359_g63646_i0 PRJNA473201 64388 254 31.635359 80.35381186 Plasmodium gaboni 647221 SAR_Eukaryotes SAR_Eukaryotes 76.8 1.37e-9   NTclustered gi|1084825779|ref|XM_018785154.1| 647221 g63646 i0 82.796 3.73228346456693 93 8 35 6 16 103 2044 1955 Plasmodium gaboni putative sentrin-specific protease 2 partial mRNA blastn 948 76.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gaboni
10647682 10647682 PRJNA473201_P_NODE_41229_length_312_cov_9.246862_g40487_i0 PRJNA473201 41229 312 9.246862 28.85020944 Plasmodium gaboni 647221 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.008   NTclustered gi|1084825779|ref|XM_018785154.1| 647221 g40487 i0 100 0.272435897435897 29 0 9 0 1 29 2034 2006 Plasmodium gaboni putative sentrin-specific protease 2 partial mRNA blastn 85 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gaboni
14472892 14472892 PRJNA473201_P_NODE_65532_length_251_cov_29.280899_g64790_i0 PRJNA473201 65532 251 29.280899 73.49505649 Plasmodium gaboni 647221 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|1084825779|ref|XM_018785154.1| 647221 g64790 i0 100 0.115537848605578 29 0 12 0 1 29 2032 2004 Plasmodium gaboni putative sentrin-specific protease 2 partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gaboni
18295682 18295682 PRJNA473201_P_NODE_55775_length_277_cov_2.480392_g55033_i0 PRJNA473201 55775 277 2.480392 6.87068584 Cryptosporidium sp. chipmunk genotype I 1280935 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|2787699113|ref|XM_067345761.1| 1280935 g55033 i0 100 0.306859205776173 29 0 10 0 101 129 514 486 Cryptosporidium sp. chipmunk genotype I uncharacterized protein (ELE39_002657), partial mRNA blastn 85 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium sp. chipmunk genotype I

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;