RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA473201" and tax_kingdom = "Heunggongvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 7 ✖

bioproject 1

  • PRJNA473201 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1719548 1719548 PRJNA473201_P_NODE_85762_length_241_cov_0.916667_g85020_i0 PRJNA473201 85762 241 0.916667 2.20916747 Caudoviricetes sp. 2832643 Viruses Viruses 440 3.959999999999999e-119   NTclustered gi|2058123527|tpg|BK033972.1| 2832643 g85020 i0 99.585 1 241 1 100 0 1 241 41051 40811 MAG TPA_asm: Caudoviricetes sp. isolate ct2Fx2, partial genome blastn 241 440 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
5547938 5547938 PRJNA473201_P_NODE_67965_length_250_cov_0.870056_g67223_i0 PRJNA473201 67965 250 0.870056 2.17514 Caudoviricetes sp. 2832643 Viruses Viruses 462 8.83e-126   NTclustered gi|2058123527|tpg|BK033972.1| 2832643 g67223 i0 100 1 250 0 100 0 1 250 45575 45824 MAG TPA_asm: Caudoviricetes sp. isolate ct2Fx2, partial genome blastn 250 462 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
10023705 10023705 PRJNA473201_P_NODE_87628_length_217_cov_23.888889_g86886_i0 PRJNA473201 87628 217 23.888889 51.83888913 Viruses 10239 Viruses Viruses 52.8 0.019   NTclustered gi|1384047946|gb|MH133207.1| 2163899 g86886 i0 100 0.258064516129032 28 0 13 0 154 181 46895 46868 Acinetobacter phage vB_AbaM_B9, complete genome blastn 56 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Acinetobacter phage vB_AbaM_B9
17021252 17021252 PRJNA473201_P_NODE_45734_length_302_cov_1.257642_g44992_i0 PRJNA473201 45734 302 1.257642 3.79807884 Caudoviricetes sp. 2832643 Viruses Viruses 553 6.32e-153   NTclustered gi|2058123527|tpg|BK033972.1| 2832643 g44992 i0 99.669 1 302 1 100 0 1 302 23101 22800 MAG TPA_asm: Caudoviricetes sp. isolate ct2Fx2, partial genome blastn 302 553 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
17021277 17021277 PRJNA473201_P_NODE_47094_length_298_cov_8.204444_g46352_i0 PRJNA473201 47094 298 8.204444 24.44924312 Shalavirus Shbh1 2560337 Viruses Viruses 52.8 0.028   NTclustered gi|1068358842|ref|NC_030925.1| 1796992 g46352 i0 100 0.187919463087248 28 0 9 0 21 48 115057 115030 Bacillus phage Shbh1, complete genome blastn 56 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Herelleviridae Shalavirus Shalavirus Shbh1
18296054 18296054 PRJNA473201_P_NODE_74115_length_247_cov_0.885057_g73373_i0 PRJNA473201 74115 247 0.885057 2.18609079 Caudoviricetes sp. 2832643 Viruses Viruses 390 4.1699999999999997e-104   NTclustered gi|2053084330|tpg|BK020160.1| 2832643 g73373 i0 95.142 2 247 12 100 0 1 247 7772 8018 MAG TPA_asm: Caudoviricetes sp. isolate ctQzd1, partial genome blastn 494 390 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
20845761 20845761 PRJNA473201_P_NODE_57977_length_271_cov_16.540404_g57235_i0 PRJNA473201 57977 271 16.540404 44.82449484 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.025   NTclustered gi|2057169509|tpg|BK058810.1| 2832643 g57235 i0 100 0.103321033210332 28 0 10 0 25 52 38672 38699 MAG TPA_asm: Caudoviricetes sp. isolate ctbEB5, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;