RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA473201" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA473201 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
443850 443850 PRJNA473201_P_NODE_41761_length_311_cov_10.521008_g41019_i0 PRJNA473201 41761 311 10.521008 32.72033488 Geminocystis sp. NIES-3709 1617448 Bacteria Bacteria 54.7 0.008   NTclustered gi|770470343|dbj|AP014821.1| 1617448 g41019 i0 96.875 0.102893890675241 32 1 10 0 12 43 1033604 1033635 Geminocystis sp. NIES-3709 DNA, complete genome blastn 32 54.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Geminocystaceae Geminocystis Geminocystis sp. NIES-3709
21497262 21497262 PRJNA473201_P_NODE_87897_length_211_cov_33.079710_g87155_i0 PRJNA473201 87897 211 33.07971 69.7981881 Cyanophyceae 3028117 Bacteria Bacteria 56.5 0.001   NTclustered gi|427368660|gb|CP003549.1| 373994 g87155 i0 94.444 0.663507109004739 36 2 17 0 91 126 7861626 7861591 Rivularia sp. PCC 7116, complete genome blastn 140 56.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Rivulariaceae Rivularia Rivularia sp. PCC 7116

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;