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contig_metadata

24 rows where analysis = "blastn", bioproject = "PRJNA473201" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 24 ✖

bioproject 1

  • PRJNA473201 · 24 ✖

analysis 1

  • blastn · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1719192 1719192 PRJNA473201_P_NODE_69542_length_249_cov_0.875000_g68800_i0 PRJNA473201 69542 249 0.875 2.17875 Didymium quitense 2059305 Evosea other_Eukaryota 215 2.72e-51   NTclustered gi|1368344018|gb|MG672463.1| 2059305 g68800 i0 85.446 22.2971887550201 213 23 84 5 38 246 441 649 Didymium quitense voucher MA-88326 elongation factor 1-alpha (EF1A) gene, partial cds blastn 5552 215 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium quitense
2994502 2994502 PRJNA473201_P_NODE_4043_length_1007_cov_2.058887_g3524_i0 PRJNA473201 4043 1007 2.058887 20.73299209 Cavenderia fasciculata 261658 Evosea other_Eukaryota 54.7 0.028   NTclustered gi|470265358|ref|XM_004361422.1| 261658 g3524 i0 100 0.05759682224429 29 0 3 0 769 797 324 352 Cavenderia fasciculata uncharacterized protein (DFA_05762), partial mRNA blastn 58 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
5547685 5547685 PRJNA473201_P_NODE_55025_length_279_cov_1.868932_g54283_i0 PRJNA473201 55025 279 1.868932 5.21432028 Cribraria violacea 1334538 Evosea other_Eukaryota 237 6.61e-58   NTclustered gi|501417113|gb|JX481322.1| 1334538 g54283 i0 82.27 22.0752688172043 282 42 99 7 2 279 540 817 Cribraria violacea voucher AMFD172 elongation factor 1A (EF1A) gene, partial cds blastn 6159 237 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Liceales Cribrariaceae Cribraria Cribraria violacea
6821108 6821108 PRJNA473201_P_NODE_21546_length_425_cov_1.829545_g20804_i0 PRJNA473201 21546 425 1.829545 7.77556625 Heterostelium album 2086695 Evosea other_Eukaryota 254 1.05e-62   NTclustered gi|1160564092|ref|XM_020582838.1| 670386 g20804 i0 79.058 12.4235294117647 382 70 89 9 49 425 16 392 Polysphondylium pallidum PN500 S60 ribosomal protein L10 (rpl10), partial mRNA blastn 5280 254 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
8096445 8096445 PRJNA473201_P_NODE_14667_length_521_cov_6.198661_g13926_i0 PRJNA473201 14667 521 6.198661 32.295023810000004 Physarella oblonga 1092565 Evosea other_Eukaryota 730 0   NTclustered gi|381139255|emb|HE655072.1| 1092565 g13926 i0 91.969 73.6679462571977 523 38 100 4 1 521 1496 976 Physarella oblonga partial 28S rRNA gene blastn 38381 730 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarella Physarella oblonga
8097827 8097827 PRJNA473201_P_NODE_9207_length_668_cov_4.374790_g8486_i0 PRJNA473201 9207 668 4.37479 29.2235972 Physarella oblonga 1092565 Evosea other_Eukaryota 926 0   NTclustered gi|374255698|emb|HE614598.1| 1092565 g8486 i0 91.892 87.7365269461078 666 49 99 5 7 668 1899 1235 Physarella oblonga partial 18S rRNA gene, strain USA blastn 58608 926 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarella Physarella oblonga
9371717 9371717 PRJNA473201_P_NODE_47168_length_298_cov_1.928889_g46426_i0 PRJNA473201 47168 298 1.928889 5.74808922 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 263 1.18e-65   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g46426 i0 82.828 20.6543624161074 297 47 99 4 4 298 1808 2102 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 6155 263 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9372127 9372127 PRJNA473201_P_NODE_68908_length_250_cov_0.870056_g68166_i0 PRJNA473201 68908 250 0.870056 2.17514 Stenamoeba amazonica 746910 Discosea other_Eukaryota 422 1.4999999999999998e-113   NTclustered gi|292399456|gb|GU810184.1| 746910 g68166 i0 97.211 45.756 251 3 100 4 1 250 1151 904 Stenamoeba amazonica strain P119 small subunit ribosomal RNA gene, partial sequence blastn 11439 422 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Stenamoeba Stenamoeba amazonica
10647158 10647158 PRJNA473201_P_NODE_13349_length_548_cov_12.058947_g12610_i0 PRJNA473201 13349 548 12.058947 66.08302956 Ripella decalvata 2047822 Discosea other_Eukaryota 835 0   NTclustered gi|1269228437|gb|MF683562.1| 2047822 g12610 i0 94.364 100.64598540146 550 21 100 6 1 548 1045 504 Ripella decalvata clone 15101 18S ribosomal RNA gene, partial sequence blastn 55154 835 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella decalvata
13198353 13198353 PRJNA473201_P_NODE_9911_length_642_cov_7.527241_g9182_i0 PRJNA473201 9911 642 7.527241 48.32488722 Fuligo septica 159720 Evosea other_Eukaryota 484 5.309999999999998e-132   NTclustered gi|37515398|emb|AJ584697.1| 159720 g9182 i0 84.879 24.4968847352025 496 58 76 15 4 488 5884 6373 Fuligo septica 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, isolate NY-1 blastn 15727 484 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica
14472061 14472061 PRJNA473201_P_NODE_18132_length_466_cov_1.959288_g17390_i0 PRJNA473201 18132 466 1.959288 9.13028208 Heterostelium album 2086695 Evosea other_Eukaryota 62.1 7.52e-5   NTclustered gi|1160555948|ref|XM_020573799.1| 670386 g17390 i0 85.965 0.122317596566524 57 8 12 0 397 453 149 93 Polysphondylium pallidum PN500 40S ribosomal protein S30 (rps30-2), partial mRNA blastn 57 62.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
14472330 14472330 PRJNA473201_P_NODE_3332_length_1094_cov_6.864838_g2882_i0 PRJNA473201 3332 1094 6.864838 75.10132772 Physarella sp. BX-2002 211109 Evosea other_Eukaryota 1144 0   NTclustered gi|24711449|gb|AY145524.1| 211109 g2882 i0 85.791 87.2385740402194 1112 121 100 33 1 1094 1104 12 Physarella sp. BX-2002 18S ribosomal RNA gene, partial sequence blastn 95439 1144 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarella Physarella sp. BX-2002
15123034 15123034 PRJNA473201_P_NODE_63332_length_257_cov_1.673913_g62590_i0 PRJNA473201 63332 257 1.673913 4.30195641 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 117 8.17e-22   NTclustered gi|260909292|gb|FJ766478.1| 435420 g62590 i0 95.833 27.8287937743191 72 3 28 0 186 257 1373 1302 Schizoplasmodiopsis amoeboidea strain BG7A-12B piece G 18S ribosomal RNA gene, partial sequence blastn 7152 117 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida   Schizoplasmodiopsis Schizoplasmodiopsis amoeboidea
15746580 15746580 PRJNA473201_P_NODE_45233_length_303_cov_2.008696_g44491_i0 PRJNA473201 45233 303 2.008696 6.08634888 Cavenderia fasciculata 261658 Evosea other_Eukaryota 89.8 2.15e-13   NTclustered gi|470236133|ref|XM_004349965.1| 261658 g44491 i0 88.889 0.455445544554455 72 8 24 0 37 108 888 959 Cavenderia fasciculata G beta like protein (gpbB), partial mRNA blastn 138 89.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
16397879 16397879 PRJNA473201_P_NODE_73693_length_247_cov_0.885057_g72951_i0 PRJNA473201 73693 247 0.885057 2.18609079 Evosea 2605435 Evosea other_Eukaryota 311 3.34e-80   NTclustered gi|330802803|ref|XM_003289355.1| 5786 g72951 i0 89.712 98.5991902834008 243 25 98 0 1 243 438 680 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_72679), mRNA blastn 24354 313 0.993610223642173 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
17020738 17020738 PRJNA473201_P_NODE_17014_length_482_cov_5.041565_g16272_i0 PRJNA473201 17014 482 5.041565 24.3003433 Ripella decalvata 2047822 Discosea other_Eukaryota 743 0   NTclustered gi|1269228431|gb|MF683556.1| 2047822 g16272 i0 94.433 101.016597510373 485 23 100 3 1 482 1159 1642 Ripella decalvata clone 26.2.11 18S ribosomal RNA gene, partial sequence blastn 48690 743 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella decalvata
17021628 17021628 PRJNA473201_P_NODE_65954_length_251_cov_0.865169_g65212_i0 PRJNA473201 65954 251 0.865169 2.17157419 Vannella ebro 207334 Discosea other_Eukaryota 320 5.65e-83   NTclustered gi|33946344|gb|AY294151.1| 207334 g65212 i0 89.641 91.3266932270916 251 26 100 0 1 251 870 1120 Vannella ebro actin mRNA, complete cds blastn 22923 320 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella ebro
18295137 18295137 PRJNA473201_P_NODE_23955_length_402_cov_3.501520_g23213_i0 PRJNA473201 23955 402 3.50152 14.0761104 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 196 1.68e-45   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g23213 i0 80 41.6268656716418 270 50 67 3 135 402 544 277 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 16734 196 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18296237 18296237 PRJNA473201_P_NODE_81815_length_243_cov_0.905882_g81073_i0 PRJNA473201 81815 243 0.905882 2.20129326 Platyamoeba placida 3454475 Discosea other_Eukaryota 311 3.27e-80   NTclustered gi|33946348|gb|AY294153.1| 197527 g81073 i0 90 97.3497942386831 240 24 99 0 1 240 92 331 Platyamoeba placida actin mRNA, partial cds blastn 23656 311 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
20220945 20220945 PRJNA473201_P_NODE_32316_length_348_cov_1.680000_g31574_i0 PRJNA473201 32316 348 1.68 5.8464 Eumycetozoa 142796 Evosea other_Eukaryota 510 4.52e-140   NTclustered gi|426281754|gb|JX681130.1| 289989 g31574 i0 93.103 100.965517241379 348 24 100 0 1 348 806 459 Didymium squamulosum actin gene, partial cds blastn 35136 510 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium squamulosum
20845697 20845697 PRJNA473201_P_NODE_54817_length_280_cov_1.149758_g54075_i0 PRJNA473201 54817 280 1.149758 3.2193224 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 189 1.88e-43   NTclustered gi|470484553|ref|XM_004344028.1| 1257118 g54075 i0 80.4 4.30714285714286 250 47 89 2 31 279 540 292 Acanthamoeba castellanii str. Neff Sadenosyl-L-homocysteine hydrolase, putative (ACA1_054200), partial mRNA blastn 1206 189 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22121190 22121190 PRJNA473201_P_NODE_84818_length_241_cov_0.916667_g84076_i0 PRJNA473201 84818 241 0.916667 2.20916747 Dermamoeba algensis 242549 Discosea other_Eukaryota 169 2.0599999999999997e-37   NTclustered gi|33946341|gb|AY294148.1| 242549 g84076 i0 91.736 49.3983402489627 121 10 50 0 1 121 1166 1046 Dermamoeba algensis small subunit ribosomal RNA gene, partial sequence blastn 11905 169 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Dermamoeba Dermamoeba algensis
23395510 23395510 PRJNA473201_P_NODE_14099_length_532_cov_17.298475_g13358_i0 PRJNA473201 14099 532 17.298475 92.027887 Ripella sp. 805 1217113 Discosea other_Eukaryota 843 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g13358 i0 95.345 101.402255639098 537 14 100 8 1 532 14 544 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 53946 843 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
24669484 24669484 PRJNA473201_P_NODE_15680_length_503_cov_7.634884_g14939_i0 PRJNA473201 15680 503 7.634884 38.40346652 Fuligo septica 159720 Evosea other_Eukaryota 292 2.66e-74   NTclustered gi|37515398|emb|AJ584697.1| 159720 g14939 i0 89.912 10.8946322067594 228 22 45 1 12 239 13789 14015 Fuligo septica 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, isolate NY-1 blastn 5480 292 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;