RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA459724" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA459724 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1717934 1717934 PRJNA459724_S_NODE_562_length_226_cov_5.952880_g559_i0 PRJNA459724 562 226 5.95288 13.4535088 Mercenaria mercenaria 6596 Mollusca Mollusca 110 1.18e-19   NTclustered gi|2441993380|ref|XM_053520321.1| 6596 g559 i0 88.043 2.46902654867257 92 11 41 0 125 216 407 316 PREDICTED: Mercenaria mercenaria histone H4-like (LOC128547447), mRNA blastn 558 110 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
2369358 2369358 PRJNA459724_S_NODE_1182_length_193_cov_2.563291_g1179_i0 PRJNA459724 1182 193 2.563291 4.94715163 Haliotis 6452 Mollusca Mollusca 71.3 4.59e-8   NTclustered gi|2245697914|ref|XM_046483411.2| 6454 g1179 i0 92 2.11917098445596 50 4 26 0 18 67 772 821 PREDICTED: Haliotis rufescens 60S ribosomal protein L8 (LOC124120553), mRNA blastn 409 71.3 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;