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contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA459724" and tax_clade = "Sar"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Sar · 18 ✖

bioproject 1

  • PRJNA459724 · 18 ✖

analysis 1

  • blastn · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2993702 2993702 PRJNA459724_P_NODE_2823_length_291_cov_9.549618_g2432_i0 PRJNA459724 2823 291 9.549618 27.78938838 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 538 1.6999999999999994e-148   NTclustered gi|1202135013|gb|KY476314.1| 151077 g2432 i0 100 100.39175257732 291 0 100 0 1 291 66 356 Chilodonella uncinata 18S ribosomal RNA gene, partial sequence blastn 29214 538 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
2993712 2993712 PRJNA459724_P_NODE_5603_length_160_cov_4.198473_g5211_i0 PRJNA459724 5603 160 4.198473 6.7175568 Moneuplotes crassus 5936 SAR_Eukaryotes SAR_Eukaryotes 80.5 6.09e-11   NTclustered gi|74039739|gb|DQ114948.1| 5936 g5211 i0 84.524 20.65625 84 9 51 4 79 160 244 163 Moneuplotes crassus clone pEC1 U2 snRNA gene, complete sequence; macronuclear blastn 3305 80.5 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus
3645075 3645075 PRJNA459724_S_NODE_23_length_488_cov_112.631347_g20_i0 PRJNA459724 23 488 112.631347 549.64097336 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 765 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g20 i0 96.344 81.0020491803279 465 17 95 0 7 471 465 1 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 39529 765 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
6197042 6197042 PRJNA459724_S_NODE_2885_length_153_cov_4.838983_g2882_i0 PRJNA459724 2885 153 4.838983 7.40364399 Poteriospumella 1117026 SAR_Eukaryotes SAR_Eukaryotes 244 1.93e-60   NTclustered gi|685431582|gb|KF697341.1| 1117027 g2882 i0 100 71.9019607843137 132 0 86 0 3 134 285 154 Poteriospumella lacustris strain JBC07 28S ribosomal RNA gene, partial sequence blastn 11001 244 1 Eukaryota Sar     Chrysophyceae Chromulinales Dinobryaceae Poteriospumella Poteriospumella lacustris
8096166 8096166 PRJNA459724_P_NODE_3027_length_273_cov_8.327869_g2636_i0 PRJNA459724 3027 273 8.327869 22.73508237 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 488 1.6099999999999996e-133   NTclustered gi|1389430803|gb|MH341631.1| 1938391 g2636 i0 98.901 100.688644688645 273 3 100 0 1 273 649 921 Chilodonella hexasticha strain C. hexasticha SC large subunit ribosomal RNA gene, partial sequence blastn 27488 488 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
8746982 8746982 PRJNA459724_P_NODE_1907_length_395_cov_31.005464_g1528_i0 PRJNA459724 1907 395 31.005464 122.4715828 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 285 3.42e-72   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g1528 i0 97.59 47.6 166 4 42 0 230 395 3082 2917 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 18802 285 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
11921783 11921783 PRJNA459724_P_NODE_5370_length_167_cov_2.608696_g4978_i0 PRJNA459724 5370 167 2.608696 4.35652232 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 303 3.5e-78   NTclustered gi|10782|emb|X54004.1| 5908 g4978 i0 99.401 94.9580838323353 167 1 100 0 1 167 1776 1610 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 15858 303 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
11921784 11921784 PRJNA459724_P_NODE_5570_length_161_cov_3.106061_g5178_i0 PRJNA459724 5570 161 3.106061 5.00075821 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 63.9 6.18e-6   NTclustered gi|471221109|ref|XM_004027451.1| 5932 g5178 i0 82.857 0.956521739130435 70 12 43 0 88 157 1157 1088 Ichthyophthirius multifiliis mitogen-activated protein kinase 2, putative (IMG5_182010) mRNA, complete cds blastn 154 63.9 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
12572858 12572858 PRJNA459724_S_NODE_2190_length_164_cov_15.790698_g2187_i0 PRJNA459724 2190 164 15.790698 25.89674472 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 283 4.46e-72   NTclustered gi|1837628855|gb|MN158348.1| 5909 g2187 i0 100 84.3353658536585 153 0 93 0 1 153 2959 2807 Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 13831 283 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
13847586 13847586 PRJNA459724_P_NODE_1751_length_421_cov_13.857143_g1381_i0 PRJNA459724 1751 421 13.857143 58.33857203 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 734 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g1381 i0 98.1 84.3895486935867 421 8 100 0 1 421 1489 1909 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 35528 734 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
15121831 15121831 PRJNA459724_S_NODE_872_length_208_cov_17.121387_g869_i0 PRJNA459724 872 208 17.121387 35.61248496 root 1 Root_unresolved Root_unresolved 353 4.46e-93   NTclustered gi|10832|emb|X54512.1| 5911 g869 i0 100 83.9038461538462 191 0 92 0 18 208 8131 8321 T. thermophila rdn A+ gene for pre-RNA, 17S rRNA, 5.8S rRNA, 26S rRNA blastn 17452 353 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
16396537 16396537 PRJNA459724_S_NODE_653_length_219_cov_6.701087_g650_i0 PRJNA459724 653 219 6.701087 14.67538053 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 276 1.06e-69   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g650 i0 97.516 29.4474885844749 161 4 74 0 52 212 3082 2922 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 6449 276 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
17671588 17671588 PRJNA459724_P_NODE_5234_length_171_cov_15.816901_g4842_i0 PRJNA459724 5234 171 15.816901 27.04690071 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 202 1.34e-47   NTclustered gi|10834|emb|X00475.1| 5911 g4842 i0 100 91.2222222222222 109 0 64 0 1 109 240 132 Tetrahymena thermophila 5S ribosomal gene blastn 15599 202 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
18294665 18294665 PRJNA459724_P_NODE_855_length_641_cov_24.251634_g596_i0 PRJNA459724 855 641 24.251634 155.45297394 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 1062 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g596 i0 96.568 63.2402496099844 641 22 100 0 1 641 11 651 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 40537 1062 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
22119576 22119576 PRJNA459724_P_NODE_4418_length_197_cov_4.244048_g4026_i0 PRJNA459724 4418 197 4.244048 8.36077456 Poteriospumella lacustris 1117027 SAR_Eukaryotes SAR_Eukaryotes 359 8.98e-95   NTclustered gi|2295553597|gb|OP378946.1| 1117027 g4026 i0 99.492 91.7005076142132 197 1 100 0 1 197 1589 1393 Poteriospumella lacustris isolate 1532 large subunit ribosomal RNA gene, partial sequence blastn 18065 359 1 Eukaryota Sar     Chrysophyceae Chromulinales Dinobryaceae Poteriospumella Poteriospumella lacustris
24045884 24045884 PRJNA459724_P_NODE_3699_length_230_cov_141.039801_g3307_i0 PRJNA459724 3699 230 141.039801 324.3915423 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 425 1.05e-114   NTclustered gi|158147318|gb|EU047813.1| 151077 g3307 i0 100 63.5 230 0 100 0 1 230 322 93 Chilodonella uncinata strain ATCC 50194 5.8S ribosomal RNA gene and internal transcribed spacer 2, partial sequence; macronuclear blastn 14605 425 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
24045894 24045894 PRJNA459724_S_NODE_2359_length_161_cov_15.452381_g2356_i0 PRJNA459724 2359 161 15.452381 24.87833341 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 76.8 7.94e-10   NTclustered gi|299830252|ref|NC_014262.1| 5885 g2356 i0 94 1.24223602484472 50 3 31 0 48 97 1441 1490 Paramecium caudatum mitochondrion, complete genome blastn 200 76.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium caudatum
24669172 24669172 PRJNA459724_P_NODE_1940_length_391_cov_4.723757_g1557_i0 PRJNA459724 1940 391 4.723757 18.46988987 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 374 7.019999999999998e-99   NTclustered gi|347439265|gb|JN111978.1| 151077 g1557 i0 100 95.0588235294118 202 0 100 0 190 391 537 738 Chilodonella uncinata strain USA_WH small subunit ribosomal RNA gene, partial sequence; macronuclear blastn 37168 374 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;