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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA459724" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 12 ✖

bioproject 1

  • PRJNA459724 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2993703 2993703 PRJNA459724_P_NODE_3043_length_272_cov_44.222222_g2652_i0 PRJNA459724 3043 272 44.222222 120.28444384 Naegleria andersoni 5764 Heterolobosea other_Eukaryota 309 1.3400000000000002e-79   NTclustered gi|292659331|gb|GU597049.1| 5764 g2652 i0 91.981 95.2095588235294 212 11 78 1 1 212 36 241 Naegleria andersoni isolate B31/FB1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 25897 309 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria andersoni
4922081 4922081 PRJNA459724_P_NODE_2164_length_359_cov_3.742424_g1776_i0 PRJNA459724 2164 359 3.742424 13.43530216 Naegleria 5761 Heterolobosea other_Eukaryota 586 7.539999999999998e-163   NTclustered gi|2618963742|gb|OR769034.1| 5762 g1776 i0 96.1 10.3704735376045 359 14 100 0 1 359 5442 5800 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 3723 586 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
5546731 5546731 PRJNA459724_P_NODE_5725_length_156_cov_2.149606_g5333_i0 PRJNA459724 5725 156 2.149606 3.35338536 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 134 4.4600000000000006e-27   NTclustered gi|11466174|ref|NC_002573.1| 5762 g5333 i0 92.553 1.01282051282051 94 6 98 1 4 96 377 284 Naegleria gruberi mitochondrion, complete genome blastn 158 134 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6820732 6820732 PRJNA459724_S_NODE_906_length_207_cov_2.366279_g903_i0 PRJNA459724 906 207 2.366279 4.89819753 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 276 9.87e-70   NTclustered gi|290991940|ref|XM_002678547.1| 5762 g903 i0 97.531 77.231884057971 162 3 78 1 1 161 1009 1170 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_56107), mRNA blastn 15987 276 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
17020385 17020385 PRJNA459724_P_NODE_1954_length_388_cov_8.005571_g1571_i0 PRJNA459724 1954 388 8.005571 31.06161548 Naegleria andersoni 5764 Heterolobosea other_Eukaryota 715 0   NTclustered gi|2351569|gb|U80057.1|NAU80057 5764 g1571 i0 100 90.6572164948454 387 0 99 0 1 387 38 424 Naegleria andersoni 18S ribosomal RNA gene, partial sequence blastn 35175 715 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria andersoni
17671578 17671578 PRJNA459724_P_NODE_1254_length_521_cov_5.979675_g941_i0 PRJNA459724 1254 521 5.979675 31.15410675 Naegleria 5761 Heterolobosea other_Eukaryota 824 0   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g941 i0 95.202 19.9596928982726 521 25 100 0 1 521 4347 3827 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 10399 830 0.992771084337349 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
17671587 17671587 PRJNA459724_P_NODE_5174_length_173_cov_10.687500_g4782_i0 PRJNA459724 5174 173 10.6875 18.489375 Leishmania 5658 Euglenozoa other_Eukaryota 254 3.71e-63   NTclustered gi|440222388|gb|JX030056.1| 5659 g4782 i0 93.529 87.4277456647399 170 11 98 0 2 171 13 182 Leishmania amazonensis isolate LaPH8.rRNA.32 28S ribosomal RNA (LSU-delta M2), partial sequence blastn 15125 254 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
20220267 20220267 PRJNA459724_P_NODE_4036_length_213_cov_62.413043_g3644_i0 PRJNA459724 4036 213 62.413043 132.93978159 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 270 4.75e-68   NTclustered gi|2414483|emb|Y00055.1| 5656 g3644 i0 91.414 113 198 16 93 1 1 198 7031 6835 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 24069 272 0.992647058823529 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
20844736 20844736 PRJNA459724_S_NODE_457_length_235_cov_14.520000_g454_i0 PRJNA459724 457 235 14.52 34.122 Stygiella incarcerata 1712417 Root_unresolved Root_unresolved 75 4.49e-9   NTclustered gi|1039091306|gb|KX235465.1| 1712417 g454 i0 83.133 0.353191489361702 83 12 35 2 40 121 1196 1277 Stygiella incarcerata 60S ribosomal protein L3-2 (Rpl3) mRNA, complete cds blastn 83 75 1 Eukaryota Discoba       Jakobida Stygiellidae Stygiella Stygiella incarcerata
22770959 22770959 PRJNA459724_P_NODE_1378_length_494_cov_4.668817_g1048_i0 PRJNA459724 1378 494 4.668817 23.06395598 Naegleria 5761 Heterolobosea other_Eukaryota 907 0   NTclustered gi|2351569|gb|U80057.1|NAU80057 5764 g1048 i0 100 98.1255060728745 491 0 99 0 1 491 720 1210 Naegleria andersoni 18S ribosomal RNA gene, partial sequence blastn 48474 907 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria andersoni
23395256 23395256 PRJNA459724_P_NODE_599_length_766_cov_34.830393_g401_i0 PRJNA459724 599 766 34.830393 266.80081038 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 1031 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g401 i0 94.118 28.7545691906005 680 36 99 3 91 766 3030 2351 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 22026 1031 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24045876 24045876 PRJNA459724_P_NODE_1579_length_454_cov_4.811765_g1048_i1 PRJNA459724 1579 454 4.811765 21.8454131 Naegleria 5761 Heterolobosea other_Eukaryota 715 0   NTclustered gi|2351569|gb|U80057.1|NAU80057 5764 g1048 i1 100 97.9669603524229 387 0 99 0 1 387 720 1106 Naegleria andersoni 18S ribosomal RNA gene, partial sequence blastn 44477 715 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria andersoni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;