RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA454503" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA454503 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
442962 442962 PRJNA454503_P_NODE_85261_length_202_cov_0.921986_g84932_i0 PRJNA454503 85261 202 0.921986 1.86241172 Magallana angulata 2784310 Mollusca Mollusca 263 7.46e-66   NTclustered gi|2416898718|ref|XR_008241844.1| 2784310 g84932 i0 90.594 2 202 14 100 4 1 202 5874 5678 PREDICTED: Crassostrea angulata uncharacterized LOC128170470 (LOC128170470), transcript variant X2, ncRNA blastn 404 263 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana angulata
8095732 8095732 PRJNA454503_P_NODE_5467_length_491_cov_2.123256_g5141_i0 PRJNA454503 5467 491 2.123256 10.42518696 Haliotis rubra 36100 Mollusca Mollusca 222 3.45e-53   NTclustered gi|2194121661|ref|XM_046716832.1| 36100 g5141 i0 81.55 17.4643584521385 271 48 55 2 206 475 389 120 PREDICTED: Haliotis rubra dynein light chain 2, cytoplasmic (LOC124280844), transcript variant X4, mRNA blastn 8575 222 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rubra
11296640 11296640 PRJNA454503_P_NODE_13989_length_307_cov_1.056911_g13660_i0 PRJNA454503 13989 307 1.056911 3.24471677 Opisthokonta 33154 Mollusca Mollusca 52.8 0.029   NTclustered gi|2912388332|ref|XM_071306682.1| 6550 g13660 i0 92.105 0.30618892508143303 38 2 12 1 147 183 497 534 PREDICTED: Mytilus edulis protein FAM50A-B-like (LOC139516520), mRNA blastn 94 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
11921150 11921150 PRJNA454503_P_NODE_37290_length_230_cov_1.538462_g36961_i0 PRJNA454503 37290 230 1.538462 3.5384626 Dreissena polymorpha 45954 Mollusca Mollusca 73.1 1.58e-8   NTclustered gi|2364329892|ref|XM_052386426.1| 45954 g36961 i0 81.443 7.63913043478261 97 11 39 4 28 117 2927 3023 PREDICTED: Dreissena polymorpha mucin-2-like (LOC127852471), mRNA blastn 1757 73.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
12572786 12572786 PRJNA454503_P_NODE_79430_length_204_cov_0.909091_g79101_i0 PRJNA454503 79430 204 0.909091 1.85454564 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 189 1.2999999999999996e-43   NTclustered gi|2296443956|ref|XM_050562754.1| 6465 g79101 i0 83.415 36.7941176470588 205 33 100 1 1 204 257 53 PREDICTED: Patella vulgata tubulin beta chain-like (LOC126832076), mRNA blastn 7506 189 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
14470719 14470719 PRJNA454503_P_NODE_15892_length_291_cov_2.173913_g15563_i0 PRJNA454503 15892 291 2.173913 6.32608683 Bradybaena similaris 145626 Mollusca Mollusca 58.4 5.79e-4   NTclustered gi|2912999222|dbj|AP039605.1| 145626 g15563 i0 92.683 1.70103092783505 41 2 14 1 4 43 30838660 30838700 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 24, sequence blastn 495 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
15744801 15744801 PRJNA454503_P_NODE_22133_length_260_cov_3.311558_g21804_i0 PRJNA454503 22133 260 3.311558 8.6100508 Physella acuta 109671 Mollusca Mollusca 470 5.519999999999998e-128   NTclustered gi|2572452079|ref|XR_009385380.1| 109671 g21804 i0 99.611 4.86923076923077 257 1 99 0 4 260 3642 3386 PREDICTED: Physella acuta large subunit ribosomal RNA (LOC131933988), rRNA blastn 1266 470 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
18294365 18294365 PRJNA454503_P_NODE_65955_length_208_cov_0.884354_g65626_i0 PRJNA454503 65955 208 0.884354 1.83945632 Magallana angulata 2784310 Mollusca Mollusca 285 1.6499999999999998e-72   NTclustered gi|2416903872|ref|XM_052838884.1| 2784310 g65626 i0 91.827 8.75 208 11 100 3 1 208 3462 3663 PREDICTED: Crassostrea angulata mothers against decapentaplegic homolog 2-like (LOC128173169), mRNA blastn 1820 285 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana angulata
19568044 19568044 PRJNA454503_P_NODE_27416_length_243_cov_1.291209_g27087_i0 PRJNA454503 27416 243 1.291209 3.13763787 Biomphalaria glabrata 6526 Mollusca Mollusca 147 9.77e-31   NTclustered gi|2502149611|ref|XM_056020795.1| 6526 g27087 i0 86.923 6.04938271604938 130 17 53 0 114 243 156 285 PREDICTED: Biomphalaria glabrata 40S ribosomal protein S14 (LOC106056330), mRNA blastn 1470 147 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
20844498 20844498 PRJNA454503_P_NODE_74137_length_205_cov_0.902778_g73808_i0 PRJNA454503 74137 205 0.902778 1.8506949 Pomacea canaliculata 400727 Mollusca Mollusca 56.5 0.001   NTclustered gi|1397694405|ref|XM_025240812.1| 400727 g73808 i0 100 4.58048780487805 30 0 15 0 4 33 700 671 PREDICTED: Pomacea canaliculata uncharacterized LOC112565387 (LOC112565387), mRNA blastn 939 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata
23395044 23395044 PRJNA454503_P_NODE_7499_length_411_cov_1.228571_g7170_i0 PRJNA454503 7499 411 1.228571 5.04942681 Patella vulgata 6465 Mollusca Mollusca 132 4.93e-26   NTclustered gi|2506327506|ref|XM_050548262.2| 6465 g7170 i0 81.988 0.776155717761557 161 23 38 5 150 307 714 557 PREDICTED: Patella vulgata nascent polypeptide-associated complex subunit alpha (LOC126820362), mRNA blastn 319 132 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;