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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA454503" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA454503 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
442116 442116 PRJNA454503_P_NODE_18901_length_274_cov_1.220657_g18572_i0 PRJNA454503 18901 274 1.220657 3.34460018 Platynereis dumerilii 6359 Annelida Annelida 233 8.37e-57   NTclustered gi|672425693|gb|KJ834012.1| 6359 g18572 i0 83.012 89.5839416058394 259 42 94 2 17 274 1697 1440 Platynereis dumerilii myosin heavy chain (Mhc) mRNA, partial cds blastn 24546 233 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii
9370257 9370257 PRJNA454503_P_NODE_39208_length_228_cov_1.167665_g38879_i0 PRJNA454503 39208 228 1.167665 2.6622762 Mesenchytraeus cf. pedatus SL-2017 2052678 Annelida Annelida 183 6.909999999999998e-42   NTclustered gi|1275874787|gb|KU728824.2| 2052678 g38879 i0 82.547 74.140350877193 212 33 92 4 19 228 783 574 Mesenchytraeus cf. pedatus SL-2017 glyceraldehyde-3-phosphate dehydrogenase mRNA, complete cds blastn 16904 183 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Enchytraeida Enchytraeidae Mesenchytraeus Mesenchytraeus cf. pedatus SL-2017
22119152 22119152 PRJNA454503_P_NODE_55458_length_211_cov_0.866667_g55129_i0 PRJNA454503 55458 211 0.866667 1.82866737 Hirudo verbana 311461 Annelida Annelida 54.7 0.005   NTclustered gi|2918369710|emb|OZ237789.1| 311461 g55129 i0 100 1.35071090047393 29 0 14 0 132 160 1570098 1570126 Hirudo verbana genome assembly, chromosome: 11 blastn 285 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;