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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA454503" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA454503 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4269253 4269253 PRJNA454503_P_NODE_24764_length_251_cov_0.915789_g24435_i0 PRJNA454503 24764 251 0.915789 2.29863039 Alloacidobacterium dinghuense 2763107 Bacteria Bacteria 374 4.27e-99   NTclustered gi|1895675831|gb|CP060394.1| 2763107 g24435 i0 96.476 180.302788844622 227 6 90 2 25 251 4008094 4007870 Alloacidobacterium dinghuense strain 4Y35 chromosome, complete genome blastn 45256 374 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Alloacidobacterium Alloacidobacterium dinghuense
5545923 5545923 PRJNA454503_P_NODE_26945_length_244_cov_1.420765_g26616_i0 PRJNA454503 26945 244 1.420765 3.4666666 Terriglobus roseus 392734 Bacteria Bacteria 361 3.219999999999999e-95   NTclustered gi|390410848|gb|CP003379.1| 926566 g26616 i0 93.443 132.30737704918 244 15 99 1 1 243 926977 927220 Terriglobus roseus DSM 18391, complete genome blastn 32283 361 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terriglobus Terriglobus roseus
6820243 6820243 PRJNA454503_P_NODE_5186_length_506_cov_1.229213_g4861_i0 PRJNA454503 5186 506 1.2292129999999999 6.21981778 Acidobacteriaceae bacterium ZG23-2 2883246 Bacteria Bacteria 647 0   NTclustered gi|2221425918|gb|CP085323.1| 2883246 g4861 i0 89.784 103.837944664032 509 46 100 4 1 506 1429455 1429960 Acidobacteriaceae bacterium ZG23-2 chromosome, complete genome blastn 52542 647 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium ZG23-2
9370768 9370768 PRJNA454503_P_NODE_85948_length_202_cov_0.921986_g85619_i0 PRJNA454503 85948 202 0.921986 1.86241172 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 156 1.3e-33   NTclustered gi|2874254091|emb|OY970174.1| 171953 g85619 i0 82.955 20.5792079207921 176 27 86 3 1 174 2484317 2484491 MAG: uncultured Acidobacteriota bacterium isolate MFD01275.bin.c.18 genome assembly, chromosome: 1 blastn 4157 156 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
10646367 10646367 PRJNA454503_P_NODE_46349_length_219_cov_2.056962_g46020_i0 PRJNA454503 46349 219 2.056962 4.50474678 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 339 1.33e-88   NTclustered gi|2621707050|emb|OY764903.1| 2212468 g46020 i0 94.521 174.063926940639 219 12 100 0 1 219 3556471 3556689 MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 blastn 38120 339 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
16396370 16396370 PRJNA454503_P_NODE_60253_length_209_cov_1.756757_g59924_i0 PRJNA454503 60253 209 1.756757 3.67162213 Acidobacterium 33973 Bacteria Bacteria 379 7.4e-101   NTclustered gi|470484216|ref|NR_076636.1| 33075 g59924 i0 99.519 113.038277511962 208 1 99 0 1 208 2649 2856 Acidobacterium capsulatum strain 161 23S ribosomal RNA gene, complete sequence blastn 23625 379 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Acidobacterium Acidobacterium capsulatum
20844481 20844481 PRJNA454503_P_NODE_72677_length_206_cov_0.896552_g72348_i0 PRJNA454503 72677 206 0.896552 1.84689712 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 368 1.57e-97   NTclustered gi|2874254159|emb|OY970389.1| 2283092 g72348 i0 99.024 155.946601941748 205 2 99 0 2 206 2617014 2617218 MAG: Pyrinomonadaceae bacterium isolate MFD09206.bin.c.1 genome assembly, chromosome: 1 blastn 32125 368 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;