contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJNA454503" and tax_kingdom = "Thermotogati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4269737 | 4269737 | PRJNA454503_P_NODE_65444_length_208_cov_0.884354_g65115_i0 | PRJNA454503 | 65444 | 208 | 0.884354 | 1.83945632 | Thermus thermophilus | 274 | Bacteria | Bacteria | 363 | 7.409999999999998e-96 | NTclustered | gi|1955386990|dbj|AP024305.1| | 274 | g65115 | i0 | 98.077 | 36.3557692307692 | 208 | 4 | 100 | 0 | 1 | 208 | 1273678 | 1273471 | Thermus thermophilus HB5008 DNA, complete genome | blastn | 7562 | 363 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 5546113 | 5546113 | PRJNA454503_P_NODE_40205_length_226_cov_2.660606_g39876_i0 | PRJNA454503 | 40205 | 226 | 2.660606 | 6.01296956 | Deinococcus aquaticus | 328692 | Bacteria | Bacteria | 257 | 3.97e-64 | NTclustered | gi|2444120906|gb|CP115165.1| | 328692 | g39876 | i0 | 89.95 | 29.0442477876106 | 199 | 20 | 88 | 0 | 28 | 226 | 80811 | 80613 | Deinococcus aquaticus strain PB-314 chromosome, complete genome | blastn | 6564 | 257 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus aquaticus | ||
| 8095229 | 8095229 | PRJNA454503_P_NODE_19427_length_271_cov_1.719048_g19098_i0 | PRJNA454503 | 19427 | 271 | 1.719048 | 4.65862008 | Deinococcus grandis | 57498 | Bacteria | Bacteria | 401 | 2.1399999999999994e-107 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g19098 | i0 | 94.318 | 205.066420664207 | 264 | 12 | 97 | 3 | 1 | 262 | 72256 | 72518 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 55573 | 401 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis | ||
| 8096006 | 8096006 | PRJNA454503_P_NODE_79067_length_204_cov_0.909091_g78738_i0 | PRJNA454503 | 79067 | 204 | 0.909091 | 1.85454564 | Deinococcus soli (ex Cha et al. 2016) | 1309411 | Bacteria | Bacteria | 246 | 7.609999999999999e-61 | NTclustered | gi|821341785|gb|CP011389.1| | 1309411 | g78738 | i0 | 99.265 | 1.50490196078431 | 136 | 1 | 67 | 0 | 69 | 204 | 2507220 | 2507085 | 'Deinococcus soli' Cha et al. 2014 strain N5, complete genome | blastn | 307 | 246 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus soli (ex Cha et al. 2016) | ||
| 11921321 | 11921321 | PRJNA454503_P_NODE_51530_length_214_cov_1.450980_g51201_i0 | PRJNA454503 | 51530 | 214 | 1.45098 | 3.1050972 | Deinococcus aquaticus | 328692 | Bacteria | Bacteria | 207 | 3.8e-49 | NTclustered | gi|2444120906|gb|CP115165.1| | 328692 | g51201 | i0 | 84.404 | 1.01869158878505 | 218 | 26 | 100 | 8 | 1 | 214 | 1626973 | 1627186 | Deinococcus aquaticus strain PB-314 chromosome, complete genome | blastn | 218 | 207 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus aquaticus | ||
| 11921677 | 11921677 | PRJNA454503_P_NODE_83230_length_202_cov_3.595745_g82901_i0 | PRJNA454503 | 83230 | 202 | 3.595745 | 7.2634049 | Deinococcus sp. AJ005 | 2652443 | Bacteria | Bacteria | 363 | 7.149999999999999e-96 | NTclustered | gi|1761809830|gb|CP044990.1| | 2652443 | g82901 | i0 | 99.497 | 273.311881188119 | 199 | 1 | 99 | 0 | 1 | 199 | 98665 | 98863 | Deinococcus sp. AJ005 chromosome, complete genome | blastn | 55209 | 363 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. AJ005 | ||
| 13847296 | 13847296 | PRJNA454503_P_NODE_40631_length_226_cov_1.575758_g40302_i0 | PRJNA454503 | 40631 | 226 | 1.575758 | 3.56121308 | Deinococcus | 1298 | Bacteria | Bacteria | 412 | 8.01e-111 | NTclustered | gi|2706840606|gb|CP149783.1| | 3112952 | g40302 | i0 | 99.558 | 3.94690265486726 | 226 | 1 | 100 | 0 | 1 | 226 | 646883 | 646658 | Deinococcus sp. VB142 chromosome 2, complete sequence | blastn | 892 | 412 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. VB142 | ||
| 17019998 | 17019998 | PRJNA454503_P_NODE_58014_length_210_cov_0.872483_g57685_i0 | PRJNA454503 | 58014 | 210 | 0.872483 | 1.8322143 | Deinococcus sp. VB142 | 3112952 | Bacteria | Bacteria | 339 | 1.26e-88 | NTclustered | gi|2706837832|gb|CP149782.1| | 3112952 | g57685 | i0 | 95.714 | 2 | 210 | 9 | 100 | 0 | 1 | 210 | 258102 | 258311 | Deinococcus sp. VB142 chromosome 1, complete sequence | blastn | 420 | 339 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. VB142 | ||
| 17671381 | 17671381 | PRJNA454503_P_NODE_5434_length_493_cov_1.858796_g5108_i0 | PRJNA454503 | 5434 | 493 | 1.858796 | 9.16386428 | Deinococcus | 1298 | Bacteria | Bacteria | 905 | 0 | NTclustered | gi|730601855|gb|CP010028.1| | 57497 | g5108 | i0 | 99.797 | 391.756592292089 | 493 | 1 | 100 | 0 | 1 | 493 | 69769 | 69277 | Deinococcus swuensis strain DY59, complete genome | blastn | 193136 | 905 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiopugnans | ||
| 18294304 | 18294304 | PRJNA454503_P_NODE_60135_length_209_cov_1.756757_g59806_i0 | PRJNA454503 | 60135 | 209 | 1.756757 | 3.67162213 | Deinococcus wulumuqiensis | 980427 | Bacteria | Bacteria | 381 | 2.0599999999999996e-101 | NTclustered | gi|1819261009|gb|CP049357.1| | 1288484 | g59806 | i0 | 99.522 | 24.5693779904306 | 209 | 1 | 100 | 0 | 1 | 209 | 1930071 | 1930279 | Deinococcus wulumuqiensis R12 chromosome, complete genome | blastn | 5135 | 381 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 23394527 | 23394527 | PRJNA454503_P_NODE_34279_length_234_cov_1.225434_g33950_i0 | PRJNA454503 | 34279 | 234 | 1.225434 | 2.86751556 | Deinococcus wulumuqiensis | 980427 | Bacteria | Bacteria | 422 | 1.39e-113 | NTclustered | gi|1819261009|gb|CP049357.1| | 1288484 | g33950 | i0 | 99.145 | 30.2991452991453 | 234 | 2 | 100 | 0 | 1 | 234 | 1926998 | 1927231 | Deinococcus wulumuqiensis R12 chromosome, complete genome | blastn | 7090 | 422 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 23394808 | 23394808 | PRJNA454503_P_NODE_54439_length_211_cov_1.446667_g54110_i0 | PRJNA454503 | 54439 | 211 | 1.446667 | 3.05246737 | Deinococcus aquaticus | 328692 | Bacteria | Bacteria | 351 | 1.63e-92 | NTclustered | gi|2444120906|gb|CP115165.1| | 328692 | g54110 | i0 | 97.115 | 5.71563981042654 | 208 | 6 | 99 | 0 | 4 | 211 | 722291 | 722084 | Deinococcus aquaticus strain PB-314 chromosome, complete genome | blastn | 1206 | 351 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus aquaticus | ||
| 24045437 | 24045437 | PRJNA454503_P_NODE_21019_length_264_cov_1.162562_g20690_i0 | PRJNA454503 | 21019 | 264 | 1.162562 | 3.06916368 | Deinococcus | 1298 | Bacteria | Bacteria | 407 | 4.47e-109 | NTclustered | gi|1339790003|gb|CP026516.1| | 2080419 | g20690 | i0 | 95.686 | 274.056818181818 | 255 | 8 | 96 | 3 | 1 | 253 | 544895 | 544642 | Deinococcus sp. NW-56 chromosome, complete genome | blastn | 72351 | 407 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. NW-56 | ||
| 24668916 | 24668916 | PRJNA454503_P_NODE_69300_length_207_cov_0.890411_g68971_i0 | PRJNA454503 | 69300 | 207 | 0.890411 | 1.84315077 | Deinococcus soli (ex Cha et al. 2016) | 1309411 | Bacteria | Bacteria | 316 | 5.819999999999998e-82 | NTclustered | gi|821341785|gb|CP011389.1| | 1309411 | g68971 | i0 | 95.897 | 3.57487922705314 | 195 | 8 | 94 | 0 | 1 | 195 | 1488544 | 1488350 | 'Deinococcus soli' Cha et al. 2014 strain N5, complete genome | blastn | 740 | 316 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus soli (ex Cha et al. 2016) |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;