RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA454503" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 7 ✖

bioproject 1

  • PRJNA454503 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2993451 2993451 PRJNA454503_P_NODE_71443_length_206_cov_0.896552_g71114_i0 PRJNA454503 71443 206 0.896552 1.84689712 brine shrimp iflavirus 3 2900464 Viruses Viruses 381 2.0199999999999994e-101   NTclustered gi|2209094754|gb|OL472449.1| 2900464 g71114 i0 100 11 206 0 100 0 1 206 1262 1467 MAG: Brine shrimp iflavirus 3 isolate NM/94-18 RNA-dependent RNA polymerase gene, complete cds blastn 2266 381 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3
6820006 6820006 PRJNA454503_P_NODE_33446_length_235_cov_1.344828_g33117_i0 PRJNA454503 33446 235 1.344828 3.1603458 brine shrimp iflavirus 3 2900464 Viruses Viruses 424 3.87e-114   NTclustered gi|2209094746|gb|OL472445.1| 2900464 g33117 i0 99.149 11 235 2 100 0 1 235 5534 5300 MAG: Brine shrimp iflavirus 3 isolate KC/14 RNA-dependent RNA polymerase gene, complete cds blastn 2585 424 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3
8095300 8095300 PRJNA454503_P_NODE_23527_length_255_cov_1.005155_g23198_i0 PRJNA454503 23527 255 1.005155 2.56314525 brine shrimp iflavirus 3 2900464 Viruses Viruses 466 6.98e-127   NTclustered gi|2209094754|gb|OL472449.1| 2900464 g23198 i0 99.608 11 255 1 100 0 1 255 7179 6925 MAG: Brine shrimp iflavirus 3 isolate NM/94-18 RNA-dependent RNA polymerase gene, complete cds blastn 2805 466 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3
10022184 10022184 PRJNA454503_P_NODE_82688_length_203_cov_0.915493_g82359_i0 PRJNA454503 82688 203 0.915493 1.85845079 Viruses 10239 Viruses Viruses 370 4.3e-98   NTclustered gi|1043460595|ref|NC_030480.1| 1685502 g82359 i0 99.507 33 203 1 100 0 1 203 712 914 Pseudogymnoascus destructans virus isolate PdV80251 RNA-dependent RNA polymerase gene, complete cds blastn 6699 370 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Pseudogymnoascus destructans partitivirus-pa
10646820 10646820 PRJNA454503_P_NODE_85389_length_202_cov_0.921986_g85060_i0 PRJNA454503 85389 202 0.921986 1.86241172 Artemvirus bsafialis 3426459 Viruses Viruses 363 7.149999999999999e-96   NTclustered gi|2209095102|gb|OL472401.1| 2900376 g85060 i0 99.01 15 202 2 100 0 1 202 1830 2031 MAG: Brine shrimp arlivirus 1 isolate GSL/15 hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 3030 363 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafialis
11921143 11921143 PRJNA454503_P_NODE_36690_length_231_cov_1.147059_g36361_i0 PRJNA454503 36690 231 1.147059 2.64970629 brine shrimp iflavirus 3 2900464 Viruses Viruses 422 1.37e-113   NTclustered gi|2209094746|gb|OL472445.1| 2900464 g36361 i0 99.567 11 231 1 100 0 1 231 3467 3697 MAG: Brine shrimp iflavirus 3 isolate KC/14 RNA-dependent RNA polymerase gene, complete cds blastn 2541 422 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3
17020153 17020153 PRJNA454503_P_NODE_7254_length_418_cov_1.450980_g6925_i0 PRJNA454503 7254 418 1.45098 6.0650964 brine shrimp iflavirus 3 2900464 Viruses Viruses 773 0   NTclustered gi|2209094754|gb|OL472449.1| 2900464 g6925 i0 100 11 418 0 100 0 1 418 8284 7867 MAG: Brine shrimp iflavirus 3 isolate NM/94-18 RNA-dependent RNA polymerase gene, complete cds blastn 4598 773 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;