contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJNA454503" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1717164 | 1717164 | PRJNA454503_P_NODE_3022_length_689_cov_5.500000_g2725_i0 | PRJNA454503 | 3022 | 689 | 5.5 | 37.895 | Humisphaera borealis | 2807512 | Bacteria | Bacteria | 604 | 4.2099999999999986e-168 | NTclustered | gi|1927742986|gb|CP063458.1| | 2807512 | g2725 | i0 | 83.188 | 108.499274310595 | 690 | 87 | 99 | 18 | 1 | 685 | 5063348 | 5062683 | Humisphaera borealis strain M1803 chromosome, complete genome | blastn | 74756 | 604 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Humisphaera | Humisphaera borealis | |
| 6819723 | 6819723 | PRJNA454503_P_NODE_14106_length_306_cov_1.053061_g13777_i0 | PRJNA454503 | 14106 | 306 | 1.053061 | 3.22236666 | Prosthecobacter dejongeii | 48465 | Bacteria | Bacteria | 473 | 5.139999999999999e-129 | NTclustered | gi|183579826|emb|AM905423.1| | 48465 | g13777 | i0 | 96.516 | 265.493464052288 | 287 | 8 | 94 | 2 | 1 | 287 | 1768 | 1484 | Prosthecobacter dejongeii partial 23S rRNA gene, strain DSM12251 | blastn | 81241 | 473 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter dejongeii | |
| 6820400 | 6820400 | PRJNA454503_P_NODE_65806_length_208_cov_0.884354_g65477_i0 | PRJNA454503 | 65806 | 208 | 0.884354 | 1.83945632 | Humisphaera borealis | 2807512 | Bacteria | Bacteria | 265 | 2.15e-66 | NTclustered | gi|1927742986|gb|CP063458.1| | 2807512 | g65477 | i0 | 89.904 | 17.9519230769231 | 208 | 17 | 99 | 4 | 3 | 208 | 5063713 | 5063508 | Humisphaera borealis strain M1803 chromosome, complete genome | blastn | 3734 | 265 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Humisphaera | Humisphaera borealis | |
| 8095894 | 8095894 | PRJNA454503_P_NODE_69447_length_207_cov_0.890411_g69118_i0 | PRJNA454503 | 69447 | 207 | 0.890411 | 1.84315077 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g69118 | i0 | 100 | 0.144927536231884 | 30 | 0 | 14 | 0 | 110 | 139 | 1644999 | 1644970 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 30 | 56.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 8746536 | 8746536 | PRJNA454503_P_NODE_18747_length_275_cov_1.037383_g18418_i0 | PRJNA454503 | 18747 | 275 | 1.037383 | 2.85280325 | Verrucomicrobiaceae | 203557 | Bacteria | Bacteria | 436 | 5.969999999999999e-118 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g18418 | i0 | 95.588 | 260.189090909091 | 272 | 12 | 99 | 0 | 4 | 275 | 2182 | 2453 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 71552 | 436 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 9370304 | 9370304 | PRJNA454503_P_NODE_43168_length_223_cov_1.604938_g42839_i0 | PRJNA454503 | 43168 | 223 | 1.604938 | 3.57901174 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 263 | 8.4e-66 | NTclustered | gi|2063814025|emb|LR586051.1| | 2052164 | g42839 | i0 | 87.892 | 1 | 223 | 27 | 100 | 0 | 1 | 223 | 7242577 | 7242799 | Gemmata bacterium CJuql4 whole genome assembly and annotation | blastn | 223 | 263 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 10646172 | 10646172 | PRJNA454503_P_NODE_3109_length_679_cov_7.092233_g2810_i0 | PRJNA454503 | 3109 | 679 | 7.092233 | 48.15626207 | Paludisphaera borealis | 1387353 | Bacteria | Bacteria | 935 | 0 | NTclustered | gi|1133581311|gb|CP019082.1| | 1387353 | g2810 | i0 | 91.545 | 136.79970544919 | 686 | 47 | 100 | 9 | 1 | 679 | 122924 | 123605 | Paludisphaera borealis strain PX4 chromosome, complete genome | blastn | 92887 | 935 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Paludisphaera | Paludisphaera borealis | |
| 13195665 | 13195665 | PRJNA454503_P_NODE_1551_length_962_cov_6.864595_g1300_i0 | PRJNA454503 | 1551 | 962 | 6.864595 | 66.0374039 | Tepidisphaeraceae bacterium | 2876886 | Bacteria | Bacteria | 1044 | 0 | NTclustered | gi|2874253799|emb|OY969783.1| | 2876886 | g1300 | i0 | 86.509 | 98.943866943867 | 971 | 106 | 100 | 21 | 1 | 962 | 4554600 | 4555554 | MAG: Tepidisphaeraceae bacterium isolate MFD04580.bin.c.1 genome assembly, chromosome: 1 | blastn | 95184 | 1044 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Tepidisphaeraceae bacterium | ||
| 13196508 | 13196508 | PRJNA454503_P_NODE_8171_length_392_cov_1.178248_g7842_i0 | PRJNA454503 | 8171 | 392 | 1.178248 | 4.61873216 | Verrucomicrobium spinosum | 2736 | Bacteria | Bacteria | 481 | 4.03e-131 | NTclustered | gi|12583973|gb|AF245377.1| | 240016 | g7842 | i0 | 88.974 | 237.163265306122 | 390 | 42 | 99 | 1 | 1 | 390 | 1042 | 1430 | Verrucomicrobium spinosum 23S ribosomal RNA gene, partial sequence | blastn | 92968 | 481 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobium | Verrucomicrobium spinosum | |
| 14471465 | 14471465 | PRJNA454503_P_NODE_7292_length_417_cov_1.376404_g6963_i0 | PRJNA454503 | 7292 | 417 | 1.376404 | 5.73960468 | Rosistilla carotiformis | 2528017 | Bacteria | Bacteria | 219 | 3.739999999999999e-52 | NTclustered | gi|1712756907|gb|CP036348.1| | 2528017 | g6963 | i0 | 77.25 | 128.175059952038 | 400 | 73 | 94 | 18 | 5 | 394 | 1459611 | 1460002 | Rosistilla carotiformis strain Poly24 chromosome | blastn | 53449 | 219 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Rosistilla | Rosistilla carotiformis | |
| 18293652 | 18293652 | PRJNA454503_P_NODE_11755_length_329_cov_1.242537_g11426_i0 | PRJNA454503 | 11755 | 329 | 1.242537 | 4.08794673 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 377 | 4.5e-100 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g11426 | i0 | 88.715 | 101.465045592705 | 319 | 23 | 95 | 11 | 19 | 329 | 7051680 | 7051367 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 33382 | 377 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 23395228 | 23395228 | PRJNA454503_P_NODE_90719_length_167_cov_4.292453_g90390_i0 | PRJNA454503 | 90719 | 167 | 4.292453 | 7.16839651 | Humisphaera borealis | 2807512 | Bacteria | Bacteria | 217 | 4.69e-52 | NTclustered | gi|1927742986|gb|CP063458.1| | 2807512 | g90390 | i0 | 91.72 | 131.167664670659 | 157 | 12 | 94 | 1 | 6 | 162 | 5062978 | 5062823 | Humisphaera borealis strain M1803 chromosome, complete genome | blastn | 21905 | 217 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Humisphaera | Humisphaera borealis | |
| 24045729 | 24045729 | PRJNA454503_P_NODE_69099_length_207_cov_0.890411_g68770_i0 | PRJNA454503 | 69099 | 207 | 0.890411 | 1.84315077 | Gemmata | 113 | Bacteria | Bacteria | 156 | 1.34e-33 | NTclustered | gi|1727537522|gb|CP042911.1| | 114 | g68770 | i0 | 80.556 | 3.1304347826087 | 216 | 30 | 100 | 4 | 1 | 207 | 2954944 | 2955156 | Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome | blastn | 648 | 156 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 24668687 | 24668687 | PRJNA454503_P_NODE_48440_length_217_cov_1.666667_g48111_i0 | PRJNA454503 | 48440 | 217 | 1.666667 | 3.61666739 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 158 | 3.95e-34 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g48111 | i0 | 87.5 | 30.4562211981567 | 136 | 17 | 63 | 0 | 1 | 136 | 2859414 | 2859549 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 6609 | 158 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;