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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA454503" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 11 ✖

bioproject 1

  • PRJNA454503 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3644580 3644580 PRJNA454503_P_NODE_18823_length_274_cov_1.957746_g18494_i0 PRJNA454503 18823 274 1.957746 5.36422404 Naegleria 5761 Heterolobosea other_Eukaryota 496 9.67e-136   NTclustered gi|2618963742|gb|OR769034.1| 5762 g18494 i0 99.27 27.7992700729927 274 2 100 0 1 274 4072 3799 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 7617 496 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
5546042 5546042 PRJNA454503_P_NODE_35125_length_233_cov_1.133721_g34796_i0 PRJNA454503 35125 233 1.133721 2.64156993 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 228 3.2299999999999988e-55   NTclustered gi|290988805|ref|XM_002677036.1| 5762 g34796 i0 86.239 0.935622317596567 218 20 91 7 19 231 973 1185 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_67563), partial mRNA blastn 218 228 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
5546656 5546656 PRJNA454503_P_NODE_85605_length_202_cov_0.921986_g85276_i0 PRJNA454503 85605 202 0.921986 1.86241172 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 283 5.729999999999999e-72   NTclustered gi|290994577|ref|XM_002679863.1| 5762 g85276 i0 92.04 0.995049504950495 201 16 99 0 2 202 1879 1679 Naegleria gruberi oxidoreductase (NAEGRDRAFT_82519), mRNA blastn 201 283 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
7471668 7471668 PRJNA454503_P_NODE_4286_length_565_cov_0.843254_g3970_i0 PRJNA454503 4286 565 0.843254 4.7643851 Naegleria 5761 Heterolobosea other_Eukaryota 1044 0   NTclustered gi|32479131|gb|AY321362.1| 51634 g3970 i0 100 99.8849557522124 565 0 100 0 1 565 1256 692 Naegleria australiensis isolate TT 18S ribosomal RNA gene, partial sequence blastn 56435 1044 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
9370697 9370697 PRJNA454503_P_NODE_78608_length_204_cov_0.909091_g78279_i0 PRJNA454503 78608 204 0.909091 1.85454564 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 233 5.919999999999999e-57   NTclustered gi|290973302|ref|XM_002669342.1| 5762 g78279 i0 87.317 1.00490196078431 205 24 100 2 1 204 397 194 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_61019), partial mRNA blastn 205 233 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10646786 10646786 PRJNA454503_P_NODE_82789_length_203_cov_0.915493_g82460_i0 PRJNA454503 82789 203 0.915493 1.85845079 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 250 5.85e-62   NTclustered gi|290987763|ref|XM_002676546.1| 5762 g82460 i0 93.939 120.256157635468 165 10 81 0 1 165 92 256 Naegleria gruberi polyubiquitin (NAEGRDRAFT_55791), mRNA blastn 24412 250 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11296678 11296678 PRJNA454503_P_NODE_16789_length_286_cov_1.066667_g16460_i0 PRJNA454503 16789 286 1.066667 3.05066762 Naegleria 5761 Heterolobosea other_Eukaryota 516 7.799999999999999e-142   NTclustered gi|2618963742|gb|OR769034.1| 5762 g16460 i0 99.298 10.1398601398601 285 2 99 0 1 285 5507 5791 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2900 516 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
16396329 16396329 PRJNA454503_P_NODE_52613_length_213_cov_1.276316_g52284_i0 PRJNA454503 52613 213 1.276316 2.71855308 Naegleria 5761 Heterolobosea other_Eukaryota 379 7.569999999999999e-101   NTclustered gi|2618963742|gb|OR769034.1| 5762 g52284 i0 99.052 820.413145539906 211 2 99 0 3 213 5242 5032 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 174748 379 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
17019515 17019515 PRJNA454503_P_NODE_23514_length_255_cov_1.030928_g23185_i0 PRJNA454503 23514 255 1.030928 2.6288664 Parabodo sp. 2815827 Euglenozoa other_Eukaryota 305 1.61e-78   NTclustered gi|2563881272|gb|OR452794.1| 2815827 g23185 i0 96.257 69.5529411764706 187 5 73 2 2 187 660 475 Parabodo sp. isolate MCu-07_N2 small subunit ribosomal RNA gene, partial sequence blastn 17736 305 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Parabodo Parabodo sp.
17020008 17020008 PRJNA454503_P_NODE_59134_length_210_cov_0.872483_g58805_i0 PRJNA454503 59134 210 0.872483 1.8322143 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 211 2.87e-50   NTclustered gi|290987322|ref|XM_002676326.1| 5762 g58805 i0 85.581 1.02380952380952 215 15 100 6 1 210 298 95 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_36914), mRNA blastn 215 211 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19568717 19568717 PRJNA454503_P_NODE_85116_length_202_cov_0.921986_g84787_i0 PRJNA454503 85116 202 0.921986 1.86241172 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 215 2.12e-51   NTclustered gi|290972772|ref|XM_002669079.1| 5762 g84787 i0 92.105 0.752475247524752 152 12 75 0 51 202 1 152 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_54415), partial mRNA blastn 152 215 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;