contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA454503" and tax_clade = "Cyanobacteriota/Melainabacteria group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8095422 | 8095422 | PRJNA454503_P_NODE_32147_length_236_cov_2.611429_g31818_i0 | PRJNA454503 | 32147 | 236 | 2.6114289999999998 | 6.16297244 | Albertania skiophila | 2109500 | Bacteria | Bacteria | 342 | 1.12e-89 | NTclustered | gi|1356054890|gb|MH030274.1| | 2109501 | g31818 | i0 | 92.797 | 207.016949152542 | 236 | 17 | 100 | 0 | 1 | 236 | 2187 | 1952 | Albertania skiophila str. SA373 Zammit 2014 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 48856 | 342 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oculatellales | Oculatellaceae | Albertania | Albertania skiophila | |
| 10646877 | 10646877 | PRJNA454503_P_NODE_90549_length_172_cov_4.513514_g90220_i0 | PRJNA454503 | 90549 | 172 | 4.513514 | 7.76324408 | uncultured Chroococcidiopsis sp. | 259957 | Bacteria | Bacteria | 292 | 7.81e-75 | NTclustered | gi|225696240|gb|FJ805907.1| | 259957 | g90220 | i0 | 97.647 | 162.273255813953 | 170 | 4 | 99 | 0 | 1 | 170 | 3227 | 3396 | Uncultured Chroococcidiopsis sp. clone NA3_10 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 27911 | 292 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 17019275 | 17019275 | PRJNA454503_P_NODE_10394_length_347_cov_4.146853_g10065_i0 | PRJNA454503 | 10394 | 347 | 4.146853 | 14.38957991 | Oculatella lusitanica | 2928764 | Bacteria | Bacteria | 479 | 1.2699999999999996e-130 | NTclustered | gi|1793889078|gb|MN061918.1| | 2692086 | g10065 | i0 | 91.667 | 157.518731988473 | 348 | 25 | 100 | 2 | 1 | 347 | 3522 | 3178 | Oculatella lusitanica LEGE 161147 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 54659 | 479 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oculatellales | Oculatellaceae | Oculatella | Oculatella lusitanica | |
| 17671316 | 17671316 | PRJNA454503_P_NODE_41814_length_225_cov_0.865854_g41485_i0 | PRJNA454503 | 41814 | 225 | 0.865854 | 1.9481715 | root | 1 | Root_unresolved | Root_unresolved | 416 | 6.159999999999998e-112 | NTclustered | gi|326205832|gb|HQ827452.1| | 1211 | g41485 | i0 | 100 | 99.6444444444444 | 225 | 0 | 100 | 0 | 1 | 225 | 386 | 162 | Uncultured cyanobacterium clone ciam16_P2R2F11 16S ribosomal RNA gene, partial sequence | blastn | 22420 | 416 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | uncultured cyanobacterium | |||||
| 22770934 | 22770934 | PRJNA454503_P_NODE_89398_length_191_cov_2.223077_g89069_i0 | PRJNA454503 | 89398 | 191 | 2.223077 | 4.24607707 | Oculatella | 1240886 | Bacteria | Bacteria | 294 | 2.47e-75 | NTclustered | gi|1300933890|gb|MG652620.1| | 1963209 | g89069 | i0 | 94.709 | 146.099476439791 | 189 | 10 | 99 | 0 | 2 | 190 | 2223 | 2411 | Oculatella ucrainica KZ-5-4-1 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 27905 | 294 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oculatellales | Oculatellaceae | Oculatella | Oculatella ucrainica |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;