RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA454154" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 2 ✖

bioproject 1

  • PRJNA454154 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11296581 11296581 PRJNA454154_S_NODE_329_length_192_cov_4.819355_g326_i0 PRJNA454154 329 192 4.819355 9.2531616 Choricystis 41299 Plants Plants 62.1 2.75e-5   NTclustered gi|2724824343|gb|PP746557.1| 41300 g326 i0 84.615 3.25520833333333 65 7 33 3 118 181 26244 26182 Choricystis parasitica culture SAG:17.98 mitochondrion, complete genome blastn 625 62.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Choricystis Choricystis parasitica
12572283 12572283 PRJNA454154_S_NODE_30_length_406_cov_8.105691_g27_i0 PRJNA454154 30 406 8.105691 32.90910546 Eukaryota 2759 Plants Plants 649 0   NTclustered gi|1714003650|gb|MN243923.1| 3079 g27 i0 100 86.1379310344828 351 0 86 0 54 404 872 522 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 34972 649 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;