RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA453567" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA453567 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
441906 441906 PRJNA453567_P_NODE_3361_length_593_cov_1.683453_g3143_i0 PRJNA453567 3361 593 1.683453 9.98287629 Linderina pennispora 61395 Fungi Fungi 287 1.4799999999999998e-72   NTclustered gi|2028325604|ref|XM_040889545.1| 61395 g3143 i0 79.009 23.6492411467116 424 85 71 4 1 422 77 498 Linderina pennispora 40S ribosomal protein S9 (DL89DRAFT_279070), partial mRNA blastn 14024 287 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
13195351 13195351 PRJNA453567_P_NODE_1051_length_1143_cov_35.814647_g963_i0 PRJNA453567 1051 1143 35.814647 409.36141521 Linderina pennispora 61395 Fungi Fungi 385 1.01e-101   NTclustered gi|2028323584|ref|XM_040889307.1| 61395 g963 i0 86.072 34.2633420822397 359 48 31 2 621 978 399 42 Linderina pennispora ADP-ribosylation factor Arf1 (DL89DRAFT_275448), partial mRNA blastn 39163 385 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
20843533 20843533 PRJNA453567_P_NODE_24777_length_176_cov_1.669065_g24540_i0 PRJNA453567 24777 176 1.669065 2.9375544 Linderina pennispora 61395 Fungi Fungi 54.7 0.004   NTclustered gi|2028321372|ref|XM_040883776.1| 61395 g24540 i0 100 0.164772727272727 29 0 16 0 126 154 2365 2337 Linderina pennispora P-loop containing nucleoside triphosphate hydrolase protein (DL89DRAFT_169417), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;