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contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA453567" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 21 ✖

tax_clade 1

bioproject 1

  • PRJNA453567 · 21 ✖

analysis 1

  • blastn · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
441861 441861 PRJNA453567_P_NODE_25641_length_173_cov_1.492647_g25404_i0 PRJNA453567 25641 173 1.492647 2.58227931 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 315 1.68e-81   NTclustered gi|290974732|ref|XM_002670053.1| 5762 g25404 i0 99.422 99.9075144508671 173 1 100 0 1 173 196 368 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55502), mRNA blastn 17284 315 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
441899 441899 PRJNA453567_P_NODE_32861_length_153_cov_1.336207_g32624_i0 PRJNA453567 32861 153 1.336207 2.04439671 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 261 1.91e-65   NTclustered gi|290987137|ref|XM_002676234.1| 5762 g32624 i0 97.386 1 153 4 100 0 1 153 417 265 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_39446), mRNA blastn 153 261 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
441902 441902 PRJNA453567_P_NODE_33301_length_152_cov_1.313043_g33064_i0 PRJNA453567 33301 152 1.313043 1.99582536 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 259 6.82e-65   NTclustered gi|290984557|ref|XM_002674948.1| 5762 g33064 i0 97.368 4.00657894736842 152 4 100 0 1 152 136 287 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_83230), mRNA blastn 609 259 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
1716679 1716679 PRJNA453567_P_NODE_20882_length_193_cov_1.615385_g20645_i0 PRJNA453567 20882 193 1.615385 3.11769305 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 307 3.2200000000000003e-79   NTclustered gi|290990585|ref|XM_002677871.1| 5762 g20645 i0 95.337 2.72020725388601 193 9 100 0 1 193 272 80 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_33131), partial mRNA blastn 525 307 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
1716695 1716695 PRJNA453567_P_NODE_22862_length_184_cov_1.170068_g22625_i0 PRJNA453567 22862 184 1.170068 2.15292512 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 252 1.44e-62   NTclustered gi|290974165|ref|XM_002669771.1| 5762 g22625 i0 91.304 3.21195652173913 184 16 100 0 1 184 484 667 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_59838), mRNA blastn 591 252 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
1716755 1716755 PRJNA453567_P_NODE_32822_length_153_cov_1.344828_g32585_i0 PRJNA453567 32822 153 1.344828 2.05758684 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 209 7.03e-50   NTclustered gi|290992301|ref|XM_002678727.1| 5762 g32585 i0 98.319 3.43137254901961 119 2 78 0 35 153 1 119 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_32592), partial mRNA blastn 525 209 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
2992501 2992501 PRJNA453567_P_NODE_26903_length_169_cov_1.181818_g26666_i0 PRJNA453567 26903 169 1.181818 1.99727242 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 206 1.02e-48   NTclustered gi|290985340|ref|XM_002675338.1| 5762 g26666 i0 91.837 0.869822485207101 147 12 87 0 2 148 483 629 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82670), mRNA blastn 147 206 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
8094932 8094932 PRJNA453567_P_NODE_19207_length_202_cov_1.654545_g18970_i0 PRJNA453567 19207 202 1.654545 3.3421809 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 263 7.46e-66   NTclustered gi|84105356|gb|DQ295229.1| 5762 g18970 i0 90.099 10.0643564356436 202 20 100 0 1 202 586 385 Naegleria gruberi translation elongation factor 1 alpha (EF-1alpha) gene, partial cds blastn 2033 263 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10645707 10645707 PRJNA453567_P_NODE_25809_length_173_cov_0.875000_g25572_i0 PRJNA453567 25809 173 0.875 1.51375 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 243 8.03e-60   NTclustered gi|9742|emb|X12563.1| 5762 g25572 i0 92.353 93.3468208092486 170 13 98 0 3 172 1375 1206 Naegleria gruberi gene for alpha-tubulin (3) blastn 16149 243 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13195402 13195402 PRJNA453567_P_NODE_17371_length_214_cov_1.841808_g17134_i0 PRJNA453567 17371 214 1.841808 3.94146912 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 182 2.3e-41   NTclustered gi|2031939198|emb|OD957504.1| 5763 g17134 i0 83.854 26.5607476635514 192 29 89 2 9 199 1535 1725 Naegleria fowleri Karachi_NF001 strain blastn 5684 182 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
14470434 14470434 PRJNA453567_P_NODE_16192_length_223_cov_1.790323_g15955_i0 PRJNA453567 16192 223 1.790323 3.99242029 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 100 6.97e-17   NTclustered gi|290998931|ref|XM_002681988.1| 5762 g15955 i0 81.25 0.645739910313901 144 9 61 8 87 221 1133 999 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_78127), mRNA blastn 144 100 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14470552 14470552 PRJNA453567_P_NODE_34172_length_150_cov_1.203540_g33935_i0 PRJNA453567 34172 150 1.20354 1.80531 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 222 8.8e-54   NTclustered gi|290983801|ref|XM_002674571.1| 5762 g33935 i0 93.333 1 150 10 100 0 1 150 513 364 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_80568), mRNA blastn 150 222 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
15744433 15744433 PRJNA453567_P_NODE_17633_length_213_cov_0.988636_g17396_i0 PRJNA453567 17633 213 0.988636 2.10579468 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 305 1.3e-78   NTclustered gi|290973076|ref|XM_002669230.1| 5762 g17396 i0 92.488 1 213 16 100 0 1 213 717 929 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82195), partial mRNA blastn 213 305 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
15744456 15744456 PRJNA453567_P_NODE_23153_length_183_cov_1.061644_g22916_i0 PRJNA453567 23153 183 1.061644 1.94280852 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 279 6.57e-71   NTclustered gi|290976150|ref|XM_002670758.1| 5762 g22916 i0 94.944 0.972677595628415 178 9 97 0 1 178 653 830 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_81712), partial mRNA blastn 178 279 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
20219618 20219618 PRJNA453567_P_NODE_20856_length_193_cov_1.750000_g20619_i0 PRJNA453567 20856 193 1.75 3.3775 Naegleria 5761 Heterolobosea other_Eukaryota 357 3.1499999999999996e-94   NTclustered gi|2618963742|gb|OR769034.1| 5762 g20619 i0 100 99.0829015544041 193 0 100 0 1 193 1782 1590 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 19123 357 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
22118399 22118399 PRJNA453567_P_NODE_31778_length_155_cov_1.983051_g31541_i0 PRJNA453567 31778 155 1.983051 3.07372905 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 187 3.3499999999999995e-43   NTclustered gi|290977970|ref|XM_002671664.1| 5762 g31541 i0 88.816 0.980645161290323 152 17 98 0 4 155 242 91 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_81456), mRNA blastn 152 187 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
22118451 22118451 PRJNA453567_P_NODE_8658_length_327_cov_2.031034_g8421_i0 PRJNA453567 8658 327 2.031034 6.64148118 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 582 8.819999999999998e-162   NTclustered gi|290988433|ref|XM_002676880.1| 5762 g8421 i0 98.777 99.8073394495413 327 4 100 0 1 327 470 144 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82621), mRNA blastn 32637 582 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24667941 24667941 PRJNA453567_P_NODE_13740_length_247_cov_1.114286_g13503_i0 PRJNA453567 13740 247 1.114286 2.75228642 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 429 8.83e-116   NTclustered gi|290988433|ref|XM_002676880.1| 5762 g13503 i0 97.976 89.0202429149798 247 5 100 0 1 247 1083 1329 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82621), mRNA blastn 21988 429 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24667953 24667953 PRJNA453567_P_NODE_14900_length_234_cov_1.944162_g14663_i0 PRJNA453567 14900 234 1.944162 4.54933908 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 388 1.41e-103   NTclustered gi|84105364|gb|DQ295230.1| 5762 g14663 i0 96.581 20.4401709401709 234 8 100 0 1 234 1180 947 Naegleria gruberi translation elongation factor 2 (EF-2) mRNA, complete cds blastn 4783 388 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24668111 24668111 PRJNA453567_P_NODE_6900_length_376_cov_2.297935_g6664_i0 PRJNA453567 6900 376 2.297935 8.6402356 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 296 1.5e-75   NTclustered gi|829211|emb|X81049.1| 5762 g6664 i0 86.131 69.7898936170213 274 38 73 0 102 375 1389 1116 N.gruberi mRNA for alpha-tubulin blastn 26241 296 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
25319625 25319625 PRJNA453567_P_NODE_22580_length_185_cov_1.391892_g22343_i0 PRJNA453567 22580 185 1.391892 2.5750002 Naegleria 5761 Heterolobosea other_Eukaryota 342 8.369999999999999e-90   NTclustered gi|2618963742|gb|OR769034.1| 5762 g22343 i0 100 99.2162162162162 185 0 100 0 1 185 1561 1377 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 18355 342 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;