RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA453567" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA453567 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3644390 3644390 PRJNA453567_P_NODE_14943_length_234_cov_1.365482_g14706_i0 PRJNA453567 14943 234 1.365482 3.19522788 Opisthokonta 33154 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2917940737|emb|OZ237566.1| 6108 g14706 i0 100 2.11111111111111 30 0 13 0 81 110 2305939 2305968 Anemonia sulcata genome assembly, chromosome: 12 blastn 494 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
4268855 4268855 PRJNA453567_P_NODE_16944_length_217_cov_2.127778_g16707_i0 PRJNA453567 16944 217 2.127778 4.61727826 Anthosactis janmayeni 856770 Cnidaria other_Eukaryota 106 1.45e-18   NTclustered gi|636577257|gb|KJ483091.1| 856770 g16707 i0 76.606 30.1336405529954 218 36 99 11 2 215 1295 1089 Anthosactis janmayeni isolate jan 28S large subunit ribosomal RNA gene and external transcribed spacer, partial sequence blastn 6539 106 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actinostolidae Anthosactis Anthosactis janmayeni
4921495 4921495 PRJNA453567_P_NODE_10364_length_292_cov_5.811765_g10127_i0 PRJNA453567 10364 292 5.811765 16.9703538 Metazoa 33208 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2917940766|emb|OZ237573.1| 6108 g10127 i0 100 2.68835616438356 30 0 10 0 143 172 11275236 11275207 Anemonia sulcata genome assembly, chromosome: 19 blastn 785 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
6819513 6819513 PRJNA453567_P_NODE_23006_length_183_cov_1.609589_g22769_i0 PRJNA453567 23006 183 1.609589 2.94554787 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 202 1.46e-47   NTclustered gi|2729084447|ref|XM_065204729.1| 499914 g22769 i0 88.166 25.7431693989071 169 20 92 0 5 173 188 356 PREDICTED: Rhopilema esculentum calmodulin (LOC135688040), mRNA blastn 4711 202 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
18293595 18293595 PRJNA453567_P_NODE_8395_length_334_cov_2.101010_g8158_i0 PRJNA453567 8395 334 2.10101 7.0173734 Nematostella vectensis 45351 Cnidaria other_Eukaryota 60.2 1.88e-4   NTclustered gi|2257859302|ref|XM_032366284.2| 45351 g8158 i0 100 0.191616766467066 32 0 10 0 47 78 478 447 PREDICTED: Nematostella vectensis inverted formin-2 (LOC116604246), transcript variant X2, mRNA blastn 64 60.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis
18944905 18944905 PRJNA453567_P_NODE_4115_length_523_cov_1.370370_g3882_i0 PRJNA453567 4115 523 1.37037 7.1670351 Metazoa 33208 Cnidaria other_Eukaryota 62.1 8.52e-5   NTclustered gi|2917940724|emb|OZ237563.1| 6108 g3882 i0 100 14.5066921606119 33 0 6 0 137 169 1530751 1530719 Anemonia sulcata genome assembly, chromosome: 9 blastn 7587 62.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
21495216 21495216 PRJNA453567_P_NODE_21037_length_192_cov_1.761290_g20800_i0 PRJNA453567 21037 192 1.76129 3.3816768 Metazoa 33208 Cnidaria other_Eukaryota 54.7 0.005   NTclustered gi|2917940693|emb|OZ237556.1| 6108 g20800 i0 100 8.5625 29 0 15 0 3 31 15247990 15247962 Anemonia sulcata genome assembly, chromosome: 2 blastn 1644 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
21495227 21495227 PRJNA453567_P_NODE_29777_length_160_cov_2.219512_g29540_i0 PRJNA453567 29777 160 2.219512 3.5512192 Metazoa 33208 Cnidaria other_Eukaryota 145 2.13e-30   NTclustered gi|605060084|gb|KF874224.1| 109801 g29540 i0 87.402 82.23125 127 14 79 2 1 127 357 233 Parvicapsula minibicornis 28S ribosomal RNA gene, partial sequence blastn 13157 145 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Parvicapsulidae Parvicapsula Parvicapsula minibicornis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;