RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA453567" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA453567 · 1 ✖

analysis 1

  • blastn · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18944871 18944871 PRJNA453567_P_NODE_16495_length_221_cov_1.271739_g16258_i0 PRJNA453567 16495 221 1.271739 2.81054319 Bacteria 2 Bacteria Bacteria 237 5.04e-58   NTclustered gi|2729058672|emb|OZ006972.1| 2137880 g16258 i0 86.512 87.8733031674208 215 29 97 0 7 221 1487731 1487517 MAG: Candidatus Gastranaerophilales bacterium isolate metabat2_pooled_hifiasm.1023 MAG genome assembly, chromosome: 1 blastn 19420 237 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Gastranaerophilales     Candidatus Gastranaerophilales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;