RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA453567" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 5 ✖

bioproject 1

  • PRJNA453567 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6819494 6819494 PRJNA453567_P_NODE_20586_length_195_cov_1.132911_g20349_i0 PRJNA453567 20586 195 1.132911 2.20917645 Cyanobium sp. M30B3 2831057 Bacteria Bacteria 62.1 2.8e-5   NTclustered gi|2041287931|gb|CP073761.1| 2831057 g20349 i0 100 0.887179487179487 33 0 17 0 158 190 2400205 2400173 MAG: Cyanobium sp. M30B3 chromosome, complete genome blastn 173 62.1 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Synechococcales Prochlorococcaceae Cyanobium Cyanobium sp. M30B3
10021636 10021636 PRJNA453567_P_NODE_34088_length_150_cov_1.380531_g33851_i0 PRJNA453567 34088 150 1.380531 2.0707965 Bacillati 1783272 Bacteria Bacteria 52.8 0.012   NTclustered gi|2041287931|gb|CP073761.1| 2831057 g33851 i0 100 0.373333333333333 28 0 19 0 52 79 2400201 2400174 MAG: Cyanobium sp. M30B3 chromosome, complete genome blastn 56 52.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Synechococcales Prochlorococcaceae Cyanobium Cyanobium sp. M30B3
10645706 10645706 PRJNA453567_P_NODE_25669_length_173_cov_1.433824_g25432_i0 PRJNA453567 25669 173 1.433824 2.48051552 Cyanobium sp. M30B3 2831057 Bacteria Bacteria 62.1 2.41e-5   NTclustered gi|2041287931|gb|CP073761.1| 2831057 g25432 i0 97.297 0.213872832369942 37 0 21 1 69 105 217668 217633 MAG: Cyanobium sp. M30B3 chromosome, complete genome blastn 37 62.1 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Synechococcales Prochlorococcaceae Cyanobium Cyanobium sp. M30B3
13195440 13195440 PRJNA453567_P_NODE_24351_length_178_cov_1.106383_g24114_i0 PRJNA453567 24351 178 1.106383 1.96936174 Synechococcus sp. ROS8604 1442557 Bacteria Bacteria 54.7 0.004   NTclustered gi|1895785424|gb|CP047946.1| 1442557 g24114 i0 100 0.162921348314607 29 0 16 0 74 102 1574594 1574622 Synechococcus sp. ROS8604 chromosome, complete genome blastn 29 54.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus Synechococcus sp. ROS8604
18944871 18944871 PRJNA453567_P_NODE_16495_length_221_cov_1.271739_g16258_i0 PRJNA453567 16495 221 1.271739 2.81054319 Bacteria 2 Bacteria Bacteria 237 5.04e-58   NTclustered gi|2729058672|emb|OZ006972.1| 2137880 g16258 i0 86.512 87.8733031674208 215 29 97 0 7 221 1487731 1487517 MAG: Candidatus Gastranaerophilales bacterium isolate metabat2_pooled_hifiasm.1023 MAG genome assembly, chromosome: 1 blastn 19420 237 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Gastranaerophilales     Candidatus Gastranaerophilales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;