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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA453567" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 12 ✖

bioproject 1

  • PRJNA453567 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2368789 2368789 PRJNA453567_P_NODE_17342_length_214_cov_7.621469_g17105_i0 PRJNA453567 17342 214 7.621469 16.30994366 Vannella 95228 Root_unresolved Root_unresolved 396 7.559999999999996e-106   NTclustered gi|507138087|gb|KC583131.1| 590481 g17105 i0 100 100.630841121495 214 0 100 0 1 214 1025 1238 Uncultured Amoebozoa clone RS.01f.10m.23 18S ribosomal RNA gene, partial sequence blastn 21535 396 1 Eukaryota Amoebozoa             uncultured Amoebozoa
5545649 5545649 PRJNA453567_P_NODE_8905_length_321_cov_2.028169_g8668_i0 PRJNA453567 8905 321 2.028169 6.51042249 Acytostelium subglobosum 361139 Evosea other_Eukaryota 63.9 1.39e-5   NTclustered gi|831768278|ref|XM_012896900.1| 1410327 g8668 i0 97.297 5.26168224299065 37 1 12 0 73 109 243 279 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 1689 63.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
6819470 6819470 PRJNA453567_P_NODE_16426_length_221_cov_1.945652_g16189_i0 PRJNA453567 16426 221 1.945652 4.29989092 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 276 1.07e-69   NTclustered gi|470484649|ref|XM_004344039.1| 1257118 g16189 i0 89.767 33.2443438914027 215 22 97 0 6 220 5563 5777 Acanthamoeba castellanii str. Neff PremRNA processing splicing factor 8, putative (ACA1_054320), partial mRNA blastn 7347 276 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6819573 6819573 PRJNA453567_P_NODE_32726_length_153_cov_1.663793_g32489_i0 PRJNA453567 32726 153 1.663793 2.54560329 Heterostelium album 2086695 Evosea other_Eukaryota 178 1.98e-40   NTclustered gi|1160553732|ref|XM_020572691.1| 670386 g32489 i0 88.966 96.2091503267974 145 14 94 2 6 149 715 858 Polysphondylium pallidum PN500 elongation factor 1 alpha (efaAI), partial mRNA blastn 14720 178 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
7471377 7471377 PRJNA453567_P_NODE_3946_length_536_cov_84.513026_g3715_i0 PRJNA453567 3946 536 84.513026 452.98981936 Vannellidae 95227 Discosea other_Eukaryota 813 0   NTclustered gi|62865947|gb|AY929922.1| 325065 g3715 i0 94.413 99.9533582089552 537 17 100 11 1 536 1682 1158 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 53575 813 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I
8094925 8094925 PRJNA453567_P_NODE_18527_length_206_cov_2.502959_g18290_i0 PRJNA453567 18527 206 2.502959 5.15609554 Vexillifera multispinosa 1105342 Discosea other_Eukaryota 292 9.75e-75   NTclustered gi|354720322|gb|HQ687481.1| 1105342 g18290 i0 92.271 75.747572815534 207 14 100 2 1 206 452 247 Vexillifera multispinosa strain P124 small subunit ribosomal RNA gene, partial sequence blastn 15604 292 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera multispinosa
9369729 9369729 PRJNA453567_P_NODE_2988_length_636_cov_2.268781_g2784_i0 PRJNA453567 2988 636 2.268781 14.42944716 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 544 8.549999999999998e-150   NTclustered gi|470484649|ref|XM_004344039.1| 1257118 g2784 i0 82.188 79.6981132075472 640 106 100 7 1 636 6408 5773 Acanthamoeba castellanii str. Neff PremRNA processing splicing factor 8, putative (ACA1_054320), partial mRNA blastn 50688 544 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10645608 10645608 PRJNA453567_P_NODE_12449_length_262_cov_1.124444_g12212_i0 PRJNA453567 12449 262 1.124444 2.94604328 Cochliopodium minus 313997 Discosea other_Eukaryota 267 7.84e-67   NTclustered gi|1914009695|gb|MT975597.1| 313997 g12212 i0 85.171 95.3015267175573 263 35 99 4 1 261 84 344 Cochliopodium minus clone 2 actin gene, partial cds blastn 24969 267 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
13195547 13195547 PRJNA453567_P_NODE_9011_length_319_cov_1.624113_g8774_i0 PRJNA453567 9011 319 1.624113 5.18092047 Dictyostelium discoideum 44689 Evosea other_Eukaryota 412 1.1899999999999997e-110   NTclustered gi|66821270|ref|XM_639040.1| 352472 g8774 i0 89.969 96.9717868338558 319 32 100 0 1 319 115 433 Dictyostelium discoideum AX4 hypothetical protein (act14) mRNA, complete cds blastn 30934 412 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
18293401 18293401 PRJNA453567_P_NODE_13775_length_246_cov_1.861244_g13538_i0 PRJNA453567 13775 246 1.861244 4.57866024 Acytostelium subglobosum 361139 Evosea other_Eukaryota 95.3 3.64e-15   NTclustered gi|831761070|ref|XM_012894692.1| 1410327 g13538 i0 87.654 3.71951219512195 81 10 33 0 16 96 399 319 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 915 95.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
19567741 19567741 PRJNA453567_P_NODE_876_length_1243_cov_2.412935_g801_i0 PRJNA453567 876 1243 2.412935 29.99278205 Vannella septentrionalis 197531 Discosea other_Eukaryota 226 7.069999999999998e-54   NTclustered gi|300078499|gb|GU001161.1| 197531 g801 i0 76.586 21.875301689461 457 79 36 23 794 1243 2295 1860 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 27191 226 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
20219657 20219657 PRJNA453567_P_NODE_7336_length_362_cov_66.729231_g7099_i0 PRJNA453567 7336 362 66.729231 241.55981622 Tubulinea 555369 Tubulinea other_Eukaryota 532 1.01e-146   NTclustered gi|11527302|gb|AF293895.1|AF293895 136450 g7099 i0 93.048 101.563535911602 374 10 100 11 1 362 1302 1671 Echinamoeba exundans small subunit ribosomal RNA gene, complete sequence blastn 36766 532 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida   Echinamoebidae Echinamoeba Echinamoeba exundans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;