RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA453111" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA453111 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
441392 441392 PRJNA453111_P_NODE_101_length_1947_cov_3.451974_g86_i0 PRJNA453111 101 1947 3.451974 67.20993378 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2883 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g86 i0 95.85 0.915767847971238 1783 70 92 4 2 1783 7108 5329 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 1783 2883 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
5545141 5545141 PRJNA453111_P_NODE_1645_length_642_cov_1.699473_g1556_i0 PRJNA453111 1645 642 1.699473 10.91061666 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 870 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g1556 i0 97.451 0.794392523364486 510 13 79 0 3 512 4195 4704 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 510 870 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
8094593 8094593 PRJNA453111_P_NODE_3027_length_468_cov_1.855696_g2935_i0 PRJNA453111 3027 468 1.855696 8.68465728 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 645 1.6399999999999994e-180   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g2935 i0 97.12 0.895299145299145 382 11 90 0 1 382 4084 3703 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 419 645 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
11920155 11920155 PRJNA453111_P_NODE_10930_length_248_cov_0.880000_g10838_i0 PRJNA453111 10930 248 0.88 2.1824 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 379 9.059999999999998e-101   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g10838 i0 98.157 0.875 217 4 88 0 29 245 1442 1658 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 217 379 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
14470092 14470092 PRJNA453111_P_NODE_6772_length_312_cov_0.966527_g6680_i0 PRJNA453111 6772 312 0.966527 3.01556424 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 407 5.4e-109   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g6680 i0 96.735 0.78525641025641 245 7 79 1 67 311 1105 862 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 245 407 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;