RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA453111" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA453111 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4268498 4268498 PRJNA453111_P_NODE_7004_length_306_cov_1.321888_g6912_i0 PRJNA453111 7004 306 1.321888 4.04497728 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 342 1.5099999999999997e-89   NTclustered gi|2522768008|gb|OR162445.1| 646526 g6912 i0 87.797 8.58496732026144 295 32 96 4 10 302 2248 1956 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2627 342 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
5545152 5545152 PRJNA453111_P_NODE_3005_length_470_cov_1.352645_g2913_i0 PRJNA453111 3005 470 1.352645 6.3574315 Ovipleistophora ovariae 103445 Fungi Fungi 545 1.7199999999999995e-150   NTclustered gi|13274171|emb|AJ278955.1| 103445 g2913 i0 87.633 1.96382978723404 469 58 99 0 1 469 1260 792 Pleistophora ovariae partial rpb1 gene for RNA polymerase II largest subunit blastn 923 545 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Ovipleistophora Ovipleistophora ovariae
8094590 8094590 PRJNA453111_P_NODE_2827_length_487_cov_31.265700_g2735_i0 PRJNA453111 2827 487 31.2657 152.263959 Vavraia culicis 103449 Fungi Fungi 278 7.199999999999999e-70   NTclustered gi|667635644|ref|XM_008076914.1| 948595 g2735 i0 78.054 0.907597535934292 442 95 91 2 31 471 465 25 Vavraia culicis subsp. floridensis uncharacterized protein (VCUG_02091), partial mRNA blastn 442 278 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Vavraia Vavraia culicis
9369298 9369298 PRJNA453111_P_NODE_148_length_1748_cov_64.960597_g129_i0 PRJNA453111 148 1748 64.960597 1135.51123556 Ovipleistophora ovariae 103445 Fungi Fungi 2732 0   NTclustered gi|2017842940|gb|MW811106.1| 103445 g129 i0 94.872 37.5446224256293 1755 78 100 7 1 1748 2321 572 Ovipleistophora ovariae isolate 2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 65628 2732 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Ovipleistophora Ovipleistophora ovariae
11920239 11920239 PRJNA453111_P_NODE_6730_length_312_cov_128.184100_g6638_i0 PRJNA453111 6730 312 128.1841 399.934392 Vavraia culicis 103449 Fungi Fungi 233 9.71e-57   NTclustered gi|667632012|ref|XM_008075098.1| 948595 g6638 i0 80.707 1.14102564102564 311 51 98 8 1 306 143 449 Vavraia culicis subsp. floridensis uncharacterized protein (VCUG_00269), mRNA blastn 356 233 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Vavraia Vavraia culicis
17018793 17018793 PRJNA453111_P_NODE_9994_length_251_cov_0.865169_g9902_i0 PRJNA453111 9994 251 0.865169 2.17157419 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 329 9.38e-86   NTclustered gi|2522768008|gb|OR162445.1| 646526 g9902 i0 90.272 16.9482071713147 257 18 100 5 1 251 3979 3724 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 4254 329 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
18944312 18944312 PRJNA453111_P_NODE_315_length_1361_cov_48.815217_g279_i0 PRJNA453111 315 1361 48.815217 664.37510337 Pleistophora 35233 Fungi Fungi 2490 0   NTclustered gi|827529328|gb|KM458272.1| 689837 g279 i0 99.706 95.5319617927994 1360 4 99 0 1 1360 9 1368 Pleistophora hyphessobryconis isolate HB1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 130019 2490 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora hyphessobryconis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;