RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA453111" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA453111 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8094605 8094605 PRJNA453111_P_NODE_4047_length_403_cov_1.509091_g3955_i0 PRJNA453111 4047 403 1.509091 6.08163673 Helobdella robusta 6412 Annelida Annelida 54.7 0.011   NTclustered gi|675879857|ref|XM_009027202.1| 6412 g3955 i0 96.97 0.0818858560794045 33 0 8 1 129 160 2089 2057 Helobdella robusta hypothetical protein partial mRNA blastn 33 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
14470126 14470126 PRJNA453111_P_NODE_9792_length_253_cov_1.283333_g9700_i0 PRJNA453111 9792 253 1.283333 3.24683249 Hirudo verbana 311461 Annelida Annelida 56.5 0.002   NTclustered gi|2918369613|emb|OZ237779.1| 311461 g9700 i0 94.595 0.288537549407115 37 0 14 2 114 148 13278400 13278364 Hirudo verbana genome assembly, chromosome: 1 blastn 73 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
17018749 17018749 PRJNA453111_P_NODE_5074_length_358_cov_2.603509_g4982_i0 PRJNA453111 5074 358 2.603509 9.32056222 Hirudo verbana 311461 Annelida Annelida 54.7 0.009   NTclustered gi|2918369706|emb|OZ237788.1| 311461 g4982 i0 100 0.0810055865921788 29 0 8 0 251 279 1540553 1540581 Hirudo verbana genome assembly, chromosome: 10 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;