RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA451191" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

tax_kingdom 1

bioproject 1

  • PRJNA451191 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4920893 4920893 PRJNA451191_P_NODE_55564_length_200_cov_3.309353_g55293_i0 PRJNA451191 55564 200 3.309353 6.618706 root 1 Root_unresolved Root_unresolved 86.1 1.71e-12   NTclustered gi|663514551|gb|KF900727.1| 1456061 g55293 i0 100 15.59 46 0 23 0 1 46 1824 1779 Uncultured marine thaumarchaeote KM3_179_B04 genomic sequence blastn 3118 86.1 1 Archaea   Thermoproteati Nitrososphaerota         uncultured marine thaumarchaeote KM3_179_B04
15743559 15743559 PRJNA451191_P_NODE_45533_length_211_cov_0.866667_g45262_i0 PRJNA451191 45533 211 0.866667 1.82866737 uncultured archaeon 115547 Archaea Archaea 385 1.61e-102   NTclustered gi|224979709|gb|FJ784310.1| 115547 g45262 i0 99.526 102.014218009479 211 1 100 0 1 211 1213 1423 Uncultured archaeon clone TX1H03 16S ribosomal RNA gene, partial sequence blastn 21525 385 1 Archaea               uncultured archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;