RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA451191" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA451191 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2990792 2990792 PRJNA451191_P_NODE_23123_length_296_cov_3.472340_g22852_i0 PRJNA451191 23123 296 3.47234 10.2781264 Brachionus manjavacas 667381 Rotifera other_Eukaryota 117 9.61e-22   NTclustered gi|2006240371|gb|MW559986.1| 667381 g22852 i0 75.451 10.4831081081081 277 49 90 17 13 278 6200 6468 Brachionus manjavacas isolate AU chromosome I mitochondrion, complete sequence blastn 3103 117 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus manjavacas
2991244 2991244 PRJNA451191_P_NODE_36303_length_236_cov_2.011429_g36032_i0 PRJNA451191 36303 236 2.011429 4.74697244 Keratella cochlearis 204738 Rotifera other_Eukaryota 267 6.94e-67   NTclustered gi|2057213512|gb|MZ438188.1| 204738 g36032 i0 87.826 87.9703389830509 230 24 97 4 9 236 759 532 Keratella cochlearis isolate Kcoc_DS cytochrome c oxidase subunit I (COX1) gene, partial cds; mitochondrial blastn 20761 267 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Keratella Keratella cochlearis
4267800 4267800 PRJNA451191_P_NODE_41864_length_220_cov_1.635220_g41593_i0 PRJNA451191 41864 220 1.63522 3.597484 Brachionus rotundiformis 96890 Rotifera other_Eukaryota 115 2.45e-21   NTclustered gi|1066800230|gb|KX364937.1| 96890 g41593 i0 78.061 1.57727272727273 196 34 87 8 3 194 5926 6116 Brachionus rotundiformis chromosome II mitochondrion, complete sequence blastn 347 115 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rotundiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;